| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0891 |
|---|
| Symbol | |
|---|
| ID | 5452262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 965796 |
|---|
| End bp | 968447 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640874651 |
|---|
| Product | polynucleotide adenylyltransferase region |
|---|
| Protein accession | YP_001410400 |
|---|
| Protein GI | 154249575 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG0618] Exopolyphosphatase-related proteins
[COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATAGAT TAAAAGTTAT TACAACTCAT TCTAATCCTG ATTTTGATGG TTTTGCTAGT
TGCGTAGGGC TTAAAAAGAT TTATCCAGAT TTTCAAATTG TTATATCTGG TAACCCATTT
CAAAATCTTA GCGAATTTTT AAGATTTTAT GGCGATTTTT TCCCTTTTAT ATACGAAAAT
GAACTCAAGG GTTTCAATGG CGATATCGAA GAATTAATTA TTGTTGATAC GCCGGATATA
GAAAGAATAG GCGAGGAAAT AAAGAGTAAG TTGTCTTCTG ATACAAAAAT TACAGTAATA
GATCACCATC CAGATATCCG TGAGTTGAAT ATAGAAAATA AGAATTTAAA TAAAATTATT
AAGCAAACTG GCGCAGCGAC TACTATTGTT GCTAATATGC TAAAAGAAAA AGGGATTAAG
CTTTCAAATG AGGAAGCTTC TTTACTTGGT ATAGGTATTT ACGAAGATAC CGGAAGTCTT
TTGTTTTCGA GTACAACACT TGAAGATTTA GAGGCTGTGA TTTATCTGTT TCAAAATGGT
CTTTCTTTGA ATACTGTTTC GGAATACATA AAATTTGACC TCACGATAGA TCAAAAGATT
GTTTTAAATA ATCTATTACA GAATGTTAAG ACTTATAATG TAAATAATTA TCAAATTACG
ATAGCTACAG CGGAAACTGA AAAATTTATT GGTGGGCTTG CGGCCATAGT TGCGAAATTT
TGGTATGCTC AAAATGTTGA TACGCTTATA GTTATCGTTA GGATGGCTAA GAAAGTTTTT
ATTACAGCTA GAACCAAATC ACCAGATATT GACCTTGCTG GATTAATGAG TGTGTTTGGC
GGCGGAGGAC ACAAGCAAGC GGCATCGGCT AAAGTGAATA TAGCCTCTGT GGAGGAAGTT
GAGCATAAAA TACTTCAGGT TTTGCCAAAT TACATAAATA CTGGACTTAA GGCGAAAGAT
ATTATGTCCT CACCGGTTAG AACGGCTCTC GCAACCGAAA GTATAGAGGA AGTTAATAAA
ATAATGGAAA TAACAGGGCA CAGCGGTATG CCTGTTGTTG AAGGAAATAA ATTGGTGGGG
ATTGTGACTA AAAAAACTGT TGATAAGGCA CTCAATCATG GACTTGGCAA GAGACCTATC
AAGTCTATAA TGAGCTCTAA GTTGATAACT GCGAAGTTAG ATACACCTGT AAGTGTCCTT
CGAAAGTTAA TGATTGAGAA TGATATTGGC CGAATTCCAA TTTTAGATGA AAATAATATT
TTAGTTGGAA TAGTTACTAG GTCTGATATT ATTAGGGCTG AAAGTAGCCC AAAAAAGTCT
TATTTAGAAA AAAGAGAGGA AATTAAAACT ACGTTCAATA ATATATCTCA TTTAATAAAC
GAAAGACTAT CAAGAAGAAT TGTAAATCTT CTCAGATTAA TTGGCTTTTT CGGTAACGAA
ATGAATTCTC CTGTATATGT TGTTGGAGGA TTTGTTAGAG ATTTGATTTT GAATATTGAA
AATTACGATA TTGATATCGT TGTTGAGGGG AATGGTATAG AATTCGCTAA GTATATGGCT
CAACAACTTA ATGCCATTGT TGTACCATAT GAGAAATTTT TTACCGCTAA TGTTATATTC
AAAGATGGAT TTAAAATCGA TGTAGCGACA GCTAGGACTG AATATTACGA AAGTCCTGGA
GAATTGCCAC AAGTGGATAT AAGTACAATA AAGAAGGATT TGTATAGAAG GGATTTCACT
ATTAATGCTA TGGCGATAAA GTTAAATCCA CAAGATTTTG GAACGTTGTA TGATTTTTTC
AATTGTCAAA AAGATCTTGA GGAAGGTGTA ATTAGAGTAC TCCACAATTT GAGCTTTGTT
GAAGATCCGA CAAGGATGAT TAGAGCTGTG AGATTTGAGC AGAGGTACGG GTTCAAGATG
GAAAACTATA CGCTTGATTT GTTGAAAAAA AATCTCTCCG AAAGATATTT AGAAAGGGTT
TCAGGCTCCA GGATTAGGCA GGAAATAGAA AAGATATTGG AAGAAAAAAA TCCAATTAAA
GCAATTAAAA GAATGGCAGA GCTTGACATG ATAAAGCATA TATTTCCAAA GACTTATTAC
ACTGCAACTA TGGAAGAAAA ATTTGTAAGG TTGTTTAAAT TTATTCCATA CTTGAAGGAA
AGATTTGAAA ACTTTAATGA TTTCTACGCT GTATCTACAA TTTTCCTTGA GTATTACGAT
AAATCTACCC TTGAAGAGAT GAGGGCAAAA TACGGTTATC CTAAGAAATT TATAGAAACT
TTAAAATTCA CTGAAAATAT AATTATCCCT GTTAAATCGC TTATCGAAAA TCGTTATCCT
TTTTCCGATA TTTATAAGGT TTGTGGAAAG TCAAATCCTT ATATTTATTC ACATATCTCC
GCTTATCTTG ATGAAGATGA ACAAAATTAT TTGCTCAGTT ACATAGATAC TGTTCTTAAC
ACAAGAATTG AGAAGGTAAC TGGTAAGTAT TTGATGGAAA GGTATCAATT GAAGGCTGGA
CCGATTTTGA ATAATATACT TGAAGAATTG TTCTGCTTAA AGCTTGATAA TAGTAATTTA
AGTGAAGAAA TTGCAATAGA AAGTATTGTG AAAAAGCATA TTGAAAAAAT TGAAGATTCA
AGTAAATTAT AG
|
|---|
| Protein sequence | MNRLKVITTH SNPDFDGFAS CVGLKKIYPD FQIVISGNPF QNLSEFLRFY GDFFPFIYEN
ELKGFNGDIE ELIIVDTPDI ERIGEEIKSK LSSDTKITVI DHHPDIRELN IENKNLNKII
KQTGAATTIV ANMLKEKGIK LSNEEASLLG IGIYEDTGSL LFSSTTLEDL EAVIYLFQNG
LSLNTVSEYI KFDLTIDQKI VLNNLLQNVK TYNVNNYQIT IATAETEKFI GGLAAIVAKF
WYAQNVDTLI VIVRMAKKVF ITARTKSPDI DLAGLMSVFG GGGHKQAASA KVNIASVEEV
EHKILQVLPN YINTGLKAKD IMSSPVRTAL ATESIEEVNK IMEITGHSGM PVVEGNKLVG
IVTKKTVDKA LNHGLGKRPI KSIMSSKLIT AKLDTPVSVL RKLMIENDIG RIPILDENNI
LVGIVTRSDI IRAESSPKKS YLEKREEIKT TFNNISHLIN ERLSRRIVNL LRLIGFFGNE
MNSPVYVVGG FVRDLILNIE NYDIDIVVEG NGIEFAKYMA QQLNAIVVPY EKFFTANVIF
KDGFKIDVAT ARTEYYESPG ELPQVDISTI KKDLYRRDFT INAMAIKLNP QDFGTLYDFF
NCQKDLEEGV IRVLHNLSFV EDPTRMIRAV RFEQRYGFKM ENYTLDLLKK NLSERYLERV
SGSRIRQEIE KILEEKNPIK AIKRMAELDM IKHIFPKTYY TATMEEKFVR LFKFIPYLKE
RFENFNDFYA VSTIFLEYYD KSTLEEMRAK YGYPKKFIET LKFTENIIIP VKSLIENRYP
FSDIYKVCGK SNPYIYSHIS AYLDEDEQNY LLSYIDTVLN TRIEKVTGKY LMERYQLKAG
PILNNILEEL FCLKLDNSNL SEEIAIESIV KKHIEKIEDS SKL
|
|---|
| |