Gene Fnod_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0887 
Symbol 
ID5452846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp962237 
End bp963220 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content36% 
IMG OID640874647 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001410396 
Protein GI154249571 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.512903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAATAC TTAGTGGTAT AAGGCCAACT GGTAAAGTCC ATGTTGGGCA TTATGTTGGT 
GTATTTGAAA ATTGGATTAA ATTGCAAAAT GAAGGTCATG ATACATTTTA TTTTATAGCT 
GATTGGCATG CCCTTACAAC TCATTACGAA GATACTTCAG AATTAAAACA CTACACAAAA 
GATTTAGCAA GGACATTAAT AGCGGTTGGA CTAGATAAAT CAACGTTATT TGTCCAATCC 
GCTGTTAAAG AACACGCAGA ATTAATGCTT ATTTTTTCTA TGGTGACGCC TCTTTCATGG 
CTTGAAAGGG TTCCAACTTA TAAAGAAATG AAACAACAGT TAGCAAATAA AGATCTTTCA 
AATGCTGGAT TTTTAATGTA TCCTGTACTT CAAGCCGCCG ATATTCTTAT TTATAAAGCA 
GATGGTGTAC CAGTTGGTGA AGACCAAGTC TATCATATTG AGTTGACGAG AGAAATTGCA 
AGAAGATTTA ATTACATATT CAAAAAGGAG ATTTTCCCTG AGCCAAAAGA GCTTCTTTCG 
AAAGTCCCAA AATTGCTTGG AACCGATGGA AGAAAGATGA GTAAAAGCTA TGGAAATACA 
ATACCTTTGA TAACTACTGA AAATGAACTT TCTAAGATGG TACTTCCAAT GGTTACTGAC 
CCTGCGAGGA AAAGAAGGAC AGACCCGGGT AATCCAGAAA ATTGTCCTGT TTGGGATTAC 
CACAAGGCGT TTGGAACAGC GGATAATGAA GAAGAAAAAC AATGGGTTTT TGAAGGTTGT 
ACCCAAGCAA AAATCGGGTG TGTTGATTGT AAGAAGTTGT TGTTGAAACA TATGACTGAG 
AAATTAAGTC CTATTTGGGA AAGGTACAAT TCAATTACAG AAGGCCAAGT TCAAGAAATA 
ATCGAAAACG GTAACGAAAA AGCAAGAGAG ATAGCAAAGC AAACAATGGA AGAAGTAAGA 
GACGCTGTTA AGATTATGTA TTGA
 
Protein sequence
MRILSGIRPT GKVHVGHYVG VFENWIKLQN EGHDTFYFIA DWHALTTHYE DTSELKHYTK 
DLARTLIAVG LDKSTLFVQS AVKEHAELML IFSMVTPLSW LERVPTYKEM KQQLANKDLS 
NAGFLMYPVL QAADILIYKA DGVPVGEDQV YHIELTREIA RRFNYIFKKE IFPEPKELLS 
KVPKLLGTDG RKMSKSYGNT IPLITTENEL SKMVLPMVTD PARKRRTDPG NPENCPVWDY 
HKAFGTADNE EEKQWVFEGC TQAKIGCVDC KKLLLKHMTE KLSPIWERYN SITEGQVQEI 
IENGNEKARE IAKQTMEEVR DAVKIMY