Gene Fnod_0885 details

Gene Information

• Locus tag: Fnod_0885
• ID: 5452521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 959572
• End bp: 961386
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640874645
• Product: GTP-binding protein LepA
• Protein accession: YP_001410394
• Protein GI: 154249569
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0481] Membrane GTPase LepA
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01393] GTP-binding protein LepA

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0424793
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAA TAGAAAATGT TAGAAATATC TGTATCATTG CGCATATAGA TCATGGTAAG 
ACAACACTCA CAGATAGAAT TTTAGAGATG ACAAATGCTA TTGAAAAAAG GAAGATGAGA 
GAGCAGTATC TTGATAGTAT GGATATCGAA CGTGAGAGAG GCATAACTAT TAAGTCACAC 
CCGCTTAGAG TGTATTACAA AGCAGAAGAT GGTAATGAGT ATGAGATAAA CATAGTTGAT 
ACACCAGGTC ACGTTGATTT TTCTTACGAA GTTGACAGAA GTATGGCGGC TGTTGAAGGA 
GCGATATTAC TAGTTGACGC TACTCAAGGT GTACAAGCTC AGACAGTTGC GAATACTTAC 
AAGGCATTAG AGCACAACCT TGAGATTGTT CCTGCGATAA ATAAGATCGA TGTCCCAACT 
GCTAATATAG AAGAAACAAT TGCCGAAATT GAAGATTTAA TTGGAATTCC AGGCGAAGAT 
ATTTACAAAA TTAGTGCAAA AGAAGGAATA GGTGTTAAAG AACTTATAGA AGCGGTGATA 
AAGCTTGTAC CAGCTCCTGC CACAAAAGAA GATGGATATT TGAGGGCTTT GATTTTCGAT 
GCAAAGTACG ACAAGTATAG AGGAGTTGTC ACTTACGTTC GAGTATTTGA TGGTGAGATT 
AAACCTGGCG AAAAAATAAT GATGATGTCA AGTAATGAAG TGTACGAAAT TGATGAAGTT 
GGTACGTTTA CGCCCGATAT GACGCCTGTT GAAAGTTTAA AAGCGGGTGA TATTGGTTAT 
ATTATCGCTG GATTGAAAGA TGTTTCGAAG GCAAAAATTG GTGATACAAT TACAAAACCA 
GAAAATCCGT CACCTGAACC GTTACCTGGA TACAAAGAGG TCAAACCTAT GGTCTTTGCG 
GGTATGTATC CTGGATTACC GGAATATTAT GAAGAATTGC GAAAGGCTCT TGATAAGTAC 
AAACTTAACG ACGCAGCTCT CGTTTATAAG CCTGATCACT CGCCAGCACT TGGCTTTGGT 
TTTAGATGTG GCTTTCTTGG ACTTTTGCAC ATGGATGTTG TGAGAGAAAG GTTAGAGAGA 
GAATTTGATA TTGCGGTAAT ATTGACGGCT CCAAACGTTG AGTACAAAGT TATTACTCAT 
GATTATAAAG AATTGATGAT TAACGACCCA GCAAAATTTC CAGAAGAAGG TGAGGTTTTA 
GAAATATACG AACCTTACGT CAAGCTTTCA ATCATTACGC CACCGGATTA CATAGGTAAA 
CTCATGAACC TTGTTCAGAA TGAAAAACGT GGTACGTTAG TTTCAACTGA GAATGCTGGG 
CATGAACGTG TTGTGATGCA TTTCGAAGTA CCATTGGCAG AGATAATATT TGATTTCTTC 
GACAGGATGA AAGCTGTAAG TCGTGGTTAT GCGTCGATGG ATTATGAATT TCTTGAATAC 
AGAAAGAGTG ATTTGGTGAA AATAACGATA TACGTAAACA AAGAACCTGT TGACGCTCTT 
TCTTTTGTCG CGCATAGGGA TAAAGCTTAC ACAATTGCAA GGAAACTTGT CGATAAACTT 
GCCGAACTTA TTCCACAGCA TCAATTTGAA ATTCCAATTC AGGCTAAAGC TGGTGGAAGG 
TTTATAGCAA GATCAACTGT AAAAGCACTT AGAAAAGATG TCCTTGCCAA GTGTTATGGA 
GGAGACGTTA CAAGAAAGAT GAAATTACTC GAAAAACAAA AGGAAGGTAA GAAGAAGTTG 
AGAGAGATTG GAAACGTCAC AATACCACAA GAAGCATTTT TGGCAATGCT TAGGATAGGT 
GAAGAGGAAG AATAA 

 

Protein sequence

MKKIENVRNI CIIAHIDHGK TTLTDRILEM TNAIEKRKMR EQYLDSMDIE RERGITIKSH 
PLRVYYKAED GNEYEINIVD TPGHVDFSYE VDRSMAAVEG AILLVDATQG VQAQTVANTY 
KALEHNLEIV PAINKIDVPT ANIEETIAEI EDLIGIPGED IYKISAKEGI GVKELIEAVI 
KLVPAPATKE DGYLRALIFD AKYDKYRGVV TYVRVFDGEI KPGEKIMMMS SNEVYEIDEV 
GTFTPDMTPV ESLKAGDIGY IIAGLKDVSK AKIGDTITKP ENPSPEPLPG YKEVKPMVFA 
GMYPGLPEYY EELRKALDKY KLNDAALVYK PDHSPALGFG FRCGFLGLLH MDVVRERLER 
EFDIAVILTA PNVEYKVITH DYKELMINDP AKFPEEGEVL EIYEPYVKLS IITPPDYIGK 
LMNLVQNEKR GTLVSTENAG HERVVMHFEV PLAEIIFDFF DRMKAVSRGY ASMDYEFLEY 
RKSDLVKITI YVNKEPVDAL SFVAHRDKAY TIARKLVDKL AELIPQHQFE IPIQAKAGGR 
FIARSTVKAL RKDVLAKCYG GDVTRKMKLL EKQKEGKKKL REIGNVTIPQ EAFLAMLRIG 
EEEE