| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0864 |
|---|
| Symbol | |
|---|
| ID | 5452497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 939484 |
|---|
| End bp | 940653 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640874623 |
|---|
| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001410373 |
|---|
| Protein GI | 154249548 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000196211 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTAA AACAAGCAAT TACAGGTGCA GAGGCGATAG CCTATGCAAT GAAACAAATA
AATCCAGACG TTGTTGCAGC GTATCCTATT ACACCACAAA CGCCAGTTGT TGAATACTTC
GCGAAATATG TTGCAGATGG TGTTGTTGAC ACTGAAATGA TACCTGTTGA AAGCGAACAC
TCTGCAATGA GTGCTGTTGT TGGCGCAGCA GCTGCTGGTG CAAGGGCGTT TACGGCAACA
GCTTCCGTTG GTCTTGCTCT TATGCACGAG GTTGTTTTCA TAGCAGCTTC TTTAAGACTT
CCAATAGTAA TGGCAGTTGC GAATAGGGCG CTCTCAGGAC CAATCAATAT TCACTGTGAC
CATAGTGACG CGATGGCTGA AAGAGATAGT GGATGGATAC AACTTTGGGC AGAAAATGCT
CAAGAAGCTT ACGACTTTAC AGTCATGGCT TACAGAATCG CAGAACATCC AGATATAAGA
CTCCCAGTTA TGGTGAACTT TGATGGATTT ATTATTTCGC ATGGTGTTGA AGTAGTAGAA
ACACTTGATG ATGAAGTTGT TAAGCAATTT GTTGGAAAAC CAATAAGAAT GAATTCATTA
CTTGATACAT CTAAACCTGT TACATATGGT GCTCTTGATT TGTACGATTA TTACTTTGAA
CACAAGAGAA GTCAAATTGA AGCGATGAAA CATGTCCCAA GAGTTTTTAA AGAAGTCGCA
GAAGAATTCG CAAAGATTTC AGGAAGAAAA TATGATTTGG TTGATGAGTA CATGGTTGAT
GATGCTCAAT ATGTCATGGT AGCATTAGGT TCAACCGCCG GAACAATAAA ACATACAATT
AACGAGTTAA GAAAAGAAGG TAAAAAAGTT GGACTTGTTA AACCATGGGT ATTTAGACCA
TTCCCAAAAG CGGAATATCA AAGAATATTA AATGGAAGAA AAGCTGTTGT AGTTCTTGAC
AGGTCAGCTT CATTTGGTGC AGAAGCTCCA CTTTATGAAA CGGTAAAATC CGCACTTTAT
GAAGTTGCTG TTAGACCACA AATGGGAAGC TATGTCTACG GTCTTGGTGG AAGGGATATA
ACACCTGCTC ACATTAGACA GGCATTCGAA GATGCATTCA ACGGCAATTT AATTGTCGAC
GAAGAAAGAT ATCTTGGGCT TAGAGAGTGA
|
|---|
| Protein sequence | MPLKQAITGA EAIAYAMKQI NPDVVAAYPI TPQTPVVEYF AKYVADGVVD TEMIPVESEH
SAMSAVVGAA AAGARAFTAT ASVGLALMHE VVFIAASLRL PIVMAVANRA LSGPINIHCD
HSDAMAERDS GWIQLWAENA QEAYDFTVMA YRIAEHPDIR LPVMVNFDGF IISHGVEVVE
TLDDEVVKQF VGKPIRMNSL LDTSKPVTYG ALDLYDYYFE HKRSQIEAMK HVPRVFKEVA
EEFAKISGRK YDLVDEYMVD DAQYVMVALG STAGTIKHTI NELRKEGKKV GLVKPWVFRP
FPKAEYQRIL NGRKAVVVLD RSASFGAEAP LYETVKSALY EVAVRPQMGS YVYGLGGRDI
TPAHIRQAFE DAFNGNLIVD EERYLGLRE
|
|---|
| |