Gene Fnod_0838 details

Gene Information

• Locus tag: Fnod_0838
• ID: 5452576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 915603
• End bp: 917414
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640874590
• Product: glucosamine--fructose-6-phosphate aminotransferase
• Protein accession: YP_001410348
• Protein GI: 154249523
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
• TIGRFAM ID: [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0609896
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTGGTA TCGTTGGAAT AATTGGTCAT GAATTTAAAG TAAGTGATTT AATAGATGGT 
CTTAAAAAAC TTGAGTACCG TGGATATGAT TCAGCAGGAG TTGCTGTTAT AGACCAAAAT 
GGTCTTTACG TTAGCAAAAG TGTCGGTAGG ATAGATAATT TGAAAAGCGT TGTTGAAACT 
GAGAAAGTAG TCCATGGAGG TATTGCGCAC ACAAGGTGGG CAACACATGG TGCACCAAGT 
GATAAAAACG CTCATCCTCA TACCGATTGT AGTGGAAAAA TCGCGGTTGT ACACAACGGA 
ATAATAGAAA ATTACCAAGA ATTGAAAAAT GAATTAATAG AAAAGGGGCA CAAATTTAAA 
TCAGACACAG ATACAGAAGT TATAAGTCAC CTCATCGAAG AAAACTTTCA AGGCGATTTA 
TACAAAGCAG TTTTGGAAGC ATTGAAAAAA CTAAAAGGGG CATTCGCGAT TGCAGTAATA 
CACTCGGATA TTCCAAATAT CATGGTAGGT GCAAGAAAAG GTAGTCCACT CGTTTTAGGT 
TGCAACGATG AGAGATGCAT ACTTGCATCA GACGTTACTC CTATAATTAA ATACACTCGT 
GACGTTATAT TCCTTGAAGA TGGTGATGTT GTTTACATAG AGGGGAATAA AGCAAAGGTA 
ACAGACTTTT CTGGAAATGT TGTCATCAGA AAACACACGC ACATTTCTTG GGACGAATCA 
GCTGCAGAAA AAGGCGGATT TAAACACTTT ATGCTCAAAG AAATACACGA AGTTCCAGAA 
GCTATAGAAA GCGCACTTGT CGGAAGATTT GATGAAGATT TAAAACCAAA TCTTAAAGAA 
CTTGATGAAT TCAATCTAGA AAAAGTTAAA AGGATACTCC TTGTTGCATG CGGTACAAGT 
TATCACGCGG GTCTTGTGTT CAAATACTTT GCGGAAAAAT ATCTCGATGT TGATGTACTT 
ATAGATGTTG CATCAGAGTT TAGATATAGA CCTATAAGGA TAGATGATAA TACGTTAACA 
ATAGCTATCT CCCAATCTGG TGAAACGGCG GATACTCTTG AGAGTGTGAG AGCAGTTAAA 
AAAGCAGGTG GTAAAGTTAT CGCAATAACC AATGTTGTTG GTTCAACGAT AACAAGAGAA 
AGTGACATAA CATTGTTCAT GAACGCAGGA CCAGAGATAG GAGTTGCTGC TTCAAAAACT 
TACGTTAACC AACTAATAAT TCTATACACA CTAGGTTTGT ACATGATGAA AAAAAGAGGG 
ATCTGGTCAG AAGAACATAA TATAATATCA AAACAATTGA ATGAATCACC AAAAATTGTT 
AGAAAGATAA TTAACAACGA AAAAATAAAT CAACTAGCTG ATTATTACAA AAACTACCAT 
CATTTCATGT ACATAGGTCG TGGAATAAAT ACAGCAACAG CAATGGAAGG TGCATTGAAA 
CTAAAAGAGA TAAGTTACAT AAACGCAGTA GCGTACCCAG CAGGCGAATT AAAACACGGA 
CCAATAGCAT TACTTGATCC AACTTTCCCA GTCTTCGCGA TTGCACCAAA AGACAGCTTG 
TATGAAAAAA TGAGAAGCAA TATCGAAGAA TCGAGGGCAA GAAACGCAAG AATACTTTCA 
ATAGCAACAG AAGGCGATGA AGAAATCAAA AAAATATCGC ATGACGTGAT ATACATCCCA 
GAAGCACATG AAGATTTATA TCCGTTAATA ATCGCACCGG TAATCCAACT ATTCGCATAC 
TACATAGCTG ACAAGCGTGG TTACGACCCG GATAAACCAA GAAACCTTGC GAAAAGCGTA 
ACAGTTGAAT AA 

 

Protein sequence

MCGIVGIIGH EFKVSDLIDG LKKLEYRGYD SAGVAVIDQN GLYVSKSVGR IDNLKSVVET 
EKVVHGGIAH TRWATHGAPS DKNAHPHTDC SGKIAVVHNG IIENYQELKN ELIEKGHKFK 
SDTDTEVISH LIEENFQGDL YKAVLEALKK LKGAFAIAVI HSDIPNIMVG ARKGSPLVLG 
CNDERCILAS DVTPIIKYTR DVIFLEDGDV VYIEGNKAKV TDFSGNVVIR KHTHISWDES 
AAEKGGFKHF MLKEIHEVPE AIESALVGRF DEDLKPNLKE LDEFNLEKVK RILLVACGTS 
YHAGLVFKYF AEKYLDVDVL IDVASEFRYR PIRIDDNTLT IAISQSGETA DTLESVRAVK 
KAGGKVIAIT NVVGSTITRE SDITLFMNAG PEIGVAASKT YVNQLIILYT LGLYMMKKRG 
IWSEEHNIIS KQLNESPKIV RKIINNEKIN QLADYYKNYH HFMYIGRGIN TATAMEGALK 
LKEISYINAV AYPAGELKHG PIALLDPTFP VFAIAPKDSL YEKMRSNIEE SRARNARILS 
IATEGDEEIK KISHDVIYIP EAHEDLYPLI IAPVIQLFAY YIADKRGYDP DKPRNLAKSV 
TVE