| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0808 |
|---|
| Symbol | |
|---|
| ID | 5452485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 883986 |
|---|
| End bp | 884897 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640874559 |
|---|
| Product | glutamate formiminotransferase |
|---|
| Protein accession | YP_001410318 |
|---|
| Protein GI | 154249493 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3643] Glutamate formiminotransferase |
|---|
| TIGRFAM ID | [TIGR02024] glutamate formiminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA TCGAGAGCGT TCCAAATTTT AGCGAAGGTA GACGAGAAGA AATCGTCAGA
CAAATTATTG AGGAAGCAAA TAAATATAAA AAAGTGCGCG TATTAGATTG GTCGATGGAC
AGAGATCATA ACAGGTCAGT TGTTACATTG GTTGGGGAAC CTGAAGAAAT TTTAGAAGCT
TTATTTGATA TGACAAAAAA AGCATCAGAA CTAATCGATC TAAGATACCA TAAAGGTGAA
CATCCAAGAA TGGGAGCAAC AGACGTTATA CCATTGGTTC CACTAGTCGG CACAAAGATG
GAAGAATGTG TTGAATGGTC AAAAAAACTT GGCGAAAGAA TCGGAAGAGA ATTAAACATA
CCAGTATACC TTTACGAAAG AAGCGCAACT TCTCCTGAGA GGGAAAACTT GTCTGAAATA
AGAAAAGGTG AATTTGAAGG ATTTTTCGAA AAAATAAAAG ACCCAAAGTG GAAACCAGAT
TTTGGTCCAG ATAAAGTACA TGAAACAGCA GGTGTCACAG CAGTTGGCGC TCGCGAATTC
CTTATAGCTT TCAACGTCAA TTTGGGGACA AACAACATAG AGATTGCAGA CAAAATAGCA
AAAGCAGTAA GGCACATTAG TGGTGGTTAT CGATACGTAA AAGCAATGGG AGTAGAACTC
AAAGAAAAAG GAATAGTTCA AGTATCGATG AACCTCACTA ACTACAAAAA ATCTCCTATA
TTTAGAGTAT TCGAAACAAT CAAAAGAGAG GCAGAAAGAT ACGGTGTACC AGTAGTTGGA
AGCGAAATAA TAGGTATGGT ACCATTACAG GCAATAGTAG AAACATTCAT GTGGTATCTC
CAAATAGATG AATTCGGTCC AAACAGAGTA ATTGAGCAAA AACTTCTTGA ACAATTGACA
AAAGAACAAT AA
|
|---|
| Protein sequence | MKLIESVPNF SEGRREEIVR QIIEEANKYK KVRVLDWSMD RDHNRSVVTL VGEPEEILEA
LFDMTKKASE LIDLRYHKGE HPRMGATDVI PLVPLVGTKM EECVEWSKKL GERIGRELNI
PVYLYERSAT SPERENLSEI RKGEFEGFFE KIKDPKWKPD FGPDKVHETA GVTAVGAREF
LIAFNVNLGT NNIEIADKIA KAVRHISGGY RYVKAMGVEL KEKGIVQVSM NLTNYKKSPI
FRVFETIKRE AERYGVPVVG SEIIGMVPLQ AIVETFMWYL QIDEFGPNRV IEQKLLEQLT
KEQ
|
|---|
| |