Gene Fnod_0801 details

Gene Information

• Locus tag: Fnod_0801
• ID: 5453073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 878283
• End bp: 878849
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640874552
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001410311
• Protein GI: 154249486
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGAAA TAATAGAAGG CATATATAAA GGTAGAAGCG AAGGTAAAAT ACTTGTTTCA 
ATTAACGGAG TAGTATTCGG AATAATAACA GATGCGGAAA GTTTTTCCGA ATTTAACGAA 
GGGGATAAAA TTTTAGTTTA CACAAAACTT ATCGTGTCTC AAGAAGATAT GACAATATAC 
GGATTTGATT CAAAAGTAAA GAAAGAAACT TTCGAAAAAT TGATAAAAGT TTCAAAACTC 
GGTCCAAAAA CAGCAATCAA AATTCTTTCA TCAACAACTG TTGATTTTTT ATCAAACGCA 
ATCGCAACTG GAGATGTCGA AAAACTTTCA TCTATTCCAG GAATAGGTAG AAAAACAGCC 
GAAAGAATGA TTACAGAACT AAAAGATGAA TTCGAGGTTG TTGAAGTAAA TGAAGAGATG 
CTTGAAGCAA TAGAAGCTCT TGTATCTTTA GGTTACTCAA AAACGCAAGC AAGAAATGCT 
GTTTCCAAGG TTCTCAAAGA AAGTCCGAAT ATAAGCAACG TTTCGAAAAT AATAAAAGAA 
GCTTTAAAGA TACTTGCAAA GATTTAA 

 

Protein sequence

MIEIIEGIYK GRSEGKILVS INGVVFGIIT DAESFSEFNE GDKILVYTKL IVSQEDMTIY 
GFDSKVKKET FEKLIKVSKL GPKTAIKILS STTVDFLSNA IATGDVEKLS SIPGIGRKTA 
ERMITELKDE FEVVEVNEEM LEAIEALVSL GYSKTQARNA VSKVLKESPN ISNVSKIIKE 
ALKILAKI