| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0797 |
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| Symbol | |
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| ID | 5452187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 873996 |
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| End bp | 875735 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640874548 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001410307 |
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| Protein GI | 154249482 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA AATTTATCAC ACTGTTTATG TTCGTACTTT TCGCTCTTTC AACATTTGTT
TTAGCGTCGC AAATTATTAT ACTCCACACA TCTAACATTT ATGGAAATGT TTTGCCATAT
GATTATTTCA GCAATATGTA TCAGCCAAAA GGTTTAGCTA TTCTTAAGAC ATATGTTGAC
AATTTAAGAA GTTCAAATCC AGACACTATT TTAATAGATA CAGGTAATTT GCTCTATGGT
TCACCATTTG GTGATTATTC CAGTTTGCAA GAAGATAATC CTGTTATAAA CGCTTTTAAT
CTTCTTAATT ACGATGCATT TGTTCCGGGG ACATTTGAGG TGAACTATTC TCCCGAAAGG
CTTATAGGTG TTTTTAAAAA TTTGAAAACA AGTGTTTTGG CTGCTAACTT GGCTAATGTA
TTTCCAAGTA ACGTTGTAAG CTTCAAAGTG AAAACTATGA GTAACGGATT CAAGGTTGCA
ATGATCGGTG TTGTTGTTCC CTACGATTCA CAAAAGTATG TTGATTATAT AGAAAGTGTT
AGGAATACGC TGAATACAGC AAAGAAAATG AATCCAGATT TGATTATTCT TGCAACAAGT
GGTGGTATAA CAAATGATCC AATCACTGGA AAACAAATAG CAATTAGAAG TGAGTTAAAT
ATAGGTGATG AACTTGTAAG AGAATTTTCG AAAGATGTTG ACATATTCTT GTTTGGTAAT
CAGGATTTCG TATATACAGG TTCAAAATCG AACAAGATAT ATTCTGTAAC TGGCAGTGAA
GCTAAGGGAG TTAATAAGAT TACATTAAAT GTAGAAAAAG ATAAATCTTT TAAGATAAAA
AGCGTAAAGA TAGAAAGAGT TTTACTTTCA AATGTGGAAC CATCTGAAAT TGTCTTAAAT
CAAGTAAAAA AATTTGAAGG TGATTTTAAT AAGTGGTTAG ACGAAGTAAT TGCGCAATCT
AACATCTCTG TTGGATTTAA CAAATACATG GCAATGTTAG ATGATAATTT TGTAACAGAA
TTCGTTAATA AGTTGATAAT TAATTACACA AATTCAAACC TAGGAATATG GAATGTATTT
AATGCCAATT GTCCAGGTAT ACCACAAGGT GAAATTACAA GAAGAGATTT GTATTCACTT
GTTGGAAAAA CGACATCTGT AAAACTAGTT AAAATGACAG GCGCAGATAT AAAGAATTAC
ATTTTGACTT CAGCAAAACT TTTGAAATAT AACGGTGTAA GAATTTTGTT TGATGAAAGT
TTGACTAATA AACCTTGGCT TTATGATTTG TTTGAAAACA TAAACTACAG CGTCGTTTTG
AACGAGAATA AAATAAGAAG CATAAAATAC CTGGGCAGAG ATTTAGATGA CAATTCAGAA
GTAATTGTAT CAGTACCATC TGTAAGAACA TACGGTACCA ATCCAATTTT AAGAGGAGAG
GTAATTGAAG ATTTTGAAAT TCCTGTTCAG CAGATTATAT TTGAGAATTT AAAAGGCAGA
GTTATAGATG GTGCAATGGA CTCGAATTAC TCTGTTTACG TGAAACTTGA GTATGAAGTG
AAACCTGGGG ATACATTTAA CCAAATCTTA CAAAGACTTG CCGTGACAGA TTCTGAGTTA
CTTGAGTTAA ATCCAATAAT AAAGAATATC AATCTAATAA GACCAGGTTG GAAACTTGTT
TATTACAAGA AATACCTAAA CTTAATACCA CCAATCAGAG AATTCTTTGA AGTAAAATAA
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| Protein sequence | MSKKFITLFM FVLFALSTFV LASQIIILHT SNIYGNVLPY DYFSNMYQPK GLAILKTYVD
NLRSSNPDTI LIDTGNLLYG SPFGDYSSLQ EDNPVINAFN LLNYDAFVPG TFEVNYSPER
LIGVFKNLKT SVLAANLANV FPSNVVSFKV KTMSNGFKVA MIGVVVPYDS QKYVDYIESV
RNTLNTAKKM NPDLIILATS GGITNDPITG KQIAIRSELN IGDELVREFS KDVDIFLFGN
QDFVYTGSKS NKIYSVTGSE AKGVNKITLN VEKDKSFKIK SVKIERVLLS NVEPSEIVLN
QVKKFEGDFN KWLDEVIAQS NISVGFNKYM AMLDDNFVTE FVNKLIINYT NSNLGIWNVF
NANCPGIPQG EITRRDLYSL VGKTTSVKLV KMTGADIKNY ILTSAKLLKY NGVRILFDES
LTNKPWLYDL FENINYSVVL NENKIRSIKY LGRDLDDNSE VIVSVPSVRT YGTNPILRGE
VIEDFEIPVQ QIIFENLKGR VIDGAMDSNY SVYVKLEYEV KPGDTFNQIL QRLAVTDSEL
LELNPIIKNI NLIRPGWKLV YYKKYLNLIP PIREFFEVK
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