Gene Fnod_0791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0791 
Symbol 
ID5452173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp867624 
End bp867959 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content34% 
IMG OID640874542 
Productanti-sigma-factor antagonist 
Protein accessionYP_001410301 
Protein GI154249476 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGCAT TTACTGAGCA ATTTGGTGTT GTTGTAGTAT CTCTCAATAG CGATGTTTCA 
ATGCAGAATG CTGTTGCTAT TCGCAACTGG GTTGTTGATA ATTTAATAAA GAAAGGAAAA
GCAAAGATTG TTTTTGACTT AACAAATGTT CCTTCAGTTG ATAGTTTTGG ACTTGGTACA
TTTGTCAGTC TCCACAAAAC GGCTTTATCT TCTGGTGGGG CTATTGCGTT TGCTTGCGCG
AATGAAAATG TAAAAAAATT GCTTTCTATG ACTGCACTTG ATAAGGTTAT TAAAAATTAT
AATTCCGTTA TGGAAGCGGT AAATAGTTTA AAATAA
 
Protein sequence
MYAFTEQFGV VVVSLNSDVS MQNAVAIRNW VVDNLIKKGK AKIVFDLTNV PSVDSFGLGT 
FVSLHKTALS SGGAIAFACA NENVKKLLSM TALDKVIKNY NSVMEAVNSL K