| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0780 |
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| Symbol | |
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| ID | 5451854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 857037 |
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| End bp | 858800 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874530 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001410290 |
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| Protein GI | 154249465 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000276782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCGT GCTTTTTCTT AAGAGTATTT TTATTTACCT ATAAGGAGGA TGAATTGATG
AAGATAATAA AAATACTTGG CTGGCTTTTA CTCATAGCTT TTACTATCTT TGGAATACTT
GGAGGATTAT TTCTTATTGG AAGAGGTTTT TATGAATTAT CAATCACACT GTTTGTTTTA
GTTTTTCTTA TAGATTTTTT CATTATCAAT CCAGCTGGTT ATCCATATAG ATACATGATA
CCGGCACTTA TATTGCTTTT TATACTTGTT CTTTATCCTA TCGCTTTTAC TATTAGAACC
GCTTTCACAA ATTACGGGAC TGGCCATATA ATGACACGTC AAGAAGTTGT TGAAAGACTT
CTTGTTGATC CAATTTACAC TTATGCCGTA GATGACGGAT TGCAACTTAA ATATTATGTA
TATGTTAGAT TTGAAGGTAC ACAACCGACG AAAGATTTTA GAGTAATTGT ATCTGACGGA
GAAAATACTT ACATTACGAG AGAATATAAA CCACTTAAAA CCGAGGCTGG AGAATTAATA
CTTGGTGAAG CCGAATTGAT TAAGTTAGAA GAAAGCGGAG TTAGAGTGGA AAGGCAAAAT
GGAATGATAG AACTAATCAA CGACGGTGGG AAAATTTTCA AATATTTTTA TTCACCCGAA
GATCCAACAA CTTTCATAAA TGAAGAATTC TTCAAATATT CAATCCTTTT CCCAACATTA
AGTAAAATAG AATTTGTTGA TAGTTTAGCT AATAGATACT CAATAAGGCA AAATGAAGAG
GGCAAACTTT TGCTTTATGG TATTAAACAT ATGTACAAAC TTGGACTTGC TGAAGTTATT
GAAAACGGAA AGAGTGTCGT GAAAACTGTT CTTATAAATA CTTCAACTGG TAAGCCTTTG
ATTGAAGAGA ATGGGACAAT TTACGACATA GATGAAAATG GTAAAAAAAT CGTTGTTGCG
GGTTATATTT CAAATTACGG GCTTAAGAAT TTCACAAGAA TATTTACAGA CCCAACCGTT
TCTGGTCCAT TTGCAAAGAT ATTCGTTTGG AACTTCACCT GGGCAGCTTT AAGCGTACTT
TTCACCTTTG TGATAGGACT CATTTTGGCG CTTGTTTTGA ACAATCCAAA CCTCAGAGGA
CGAGCAATAT ACCGCTCACT TTTAATTATC CCTTGGGCAA TACCTGCGTT CATATCTGTT
TTGGTTTGGA AAAATGGATT TTTCAACGAA ACTTACGGTA TATTTAATAA GTTCATCATA
ACCAAACTCT TTGGTGCTGA ACCAATAAAA TGGATGAATG ACCCATTTTG GGCAAAAGTT
GCCGTTTTAA CTGTTAATAC ATGGCTTGGA TTCCCTTACA TGATGGTTGT TACACTTGGA
GCGTTACAGA GTATACCAGA AGATTACTAT GAAGCTGCGG CCATTGACGG GGCAACAAAA
TGGCAAAGAT TTTGGAAAAT TACATTCCCT CTTCTCATGA CAACAGTTGC ACCATTACTA
GTTGGTAGCT TCGCTTTTAA CTTCAATAAT TTTGTTAACA TCTATTTACT TACAGGTGGT
GGACCAGCAA TGCCAAATAC CACAACACCG GCAGGTTCGA CAGATATATT GATATCTTAC
ACTTATAAAC TTGCTTTTGA AGGTGGACGT GGTCAAGACT TTGGATTTGC GTCAGCAATT
TCCATTCTCA TATTCCTAAT CGTTGGAAGT TTGAGCTTTA TAAACTTTAA ACTCTCAGGT
TCCTTTGAAG AGGTGAATAG ATAA
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| Protein sequence | MPPCFFLRVF LFTYKEDELM KIIKILGWLL LIAFTIFGIL GGLFLIGRGF YELSITLFVL
VFLIDFFIIN PAGYPYRYMI PALILLFILV LYPIAFTIRT AFTNYGTGHI MTRQEVVERL
LVDPIYTYAV DDGLQLKYYV YVRFEGTQPT KDFRVIVSDG ENTYITREYK PLKTEAGELI
LGEAELIKLE ESGVRVERQN GMIELINDGG KIFKYFYSPE DPTTFINEEF FKYSILFPTL
SKIEFVDSLA NRYSIRQNEE GKLLLYGIKH MYKLGLAEVI ENGKSVVKTV LINTSTGKPL
IEENGTIYDI DENGKKIVVA GYISNYGLKN FTRIFTDPTV SGPFAKIFVW NFTWAALSVL
FTFVIGLILA LVLNNPNLRG RAIYRSLLII PWAIPAFISV LVWKNGFFNE TYGIFNKFII
TKLFGAEPIK WMNDPFWAKV AVLTVNTWLG FPYMMVVTLG ALQSIPEDYY EAAAIDGATK
WQRFWKITFP LLMTTVAPLL VGSFAFNFNN FVNIYLLTGG GPAMPNTTTP AGSTDILISY
TYKLAFEGGR GQDFGFASAI SILIFLIVGS LSFINFKLSG SFEEVNR
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