Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0753 |
Symbol | |
ID | 5451539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 824723 |
End bp | 825436 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640874504 |
Product | nuclease |
Protein accession | YP_001410264 |
Protein GI | 154249439 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.838035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAA AAGCAAAACA AAACACTTTA ATAACTGCTA TCGTTTTATC AATAATTACC ATTATCTTAA TACTTACTCA AAAACAAGGA TTAATGAAAG CATGTGTAAC TAGAGTTGTC GATGGAGACA CCATTAAAGT TGAAGCAAAT GGTAAAACGT ACACAGTTAG ATTAATAGGA GTAAACACTC CCGAAACTAA TCATCCAACA AAAGGAGTTG AACCATATGG ACCTGAAGCC AAAGAATTTA CAACTAAACA ATTAACAGAA AAAACCGTTT GGCTTGAATT GGACGTTGAG GAGAAAGATA AATACAACCG TTTGCTTGCG TATGTCTGGT TGGAAAAACC AGTTAACTTT TCGGAGGAAG AAATTAGAAA GAAAATGTTC AATGCGATAC TTTTACTCGA AGGGTACGCG CAGGTTATGA CCGTACCACC CAACGTCAAA TATGCTGATT ATTTTGTAAA ATTCCAAAGA GAGGCTTTTG AAAAGCAAAA AGGGCTTTGG GGATTGAGTA TGTACAATGA AAACACGAAA AGTGATTTTG TAGTTTACAT ATCAAAAGAT GGAAAGAAAT ACCACTTAAA AAGTTGTAGG TACGTTAATA GTAAATACTT TCCAGTGAAT ATAGAAGAGG CTAGACAAAA AGGTTACACA TCCTGCGGAA TTTGTAAACC AGATGAAGCT TACGAAGAAT GGAAAAGTAA ATAA
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Protein sequence | MPKKAKQNTL ITAIVLSIIT IILILTQKQG LMKACVTRVV DGDTIKVEAN GKTYTVRLIG VNTPETNHPT KGVEPYGPEA KEFTTKQLTE KTVWLELDVE EKDKYNRLLA YVWLEKPVNF SEEEIRKKMF NAILLLEGYA QVMTVPPNVK YADYFVKFQR EAFEKQKGLW GLSMYNENTK SDFVVYISKD GKKYHLKSCR YVNSKYFPVN IEEARQKGYT SCGICKPDEA YEEWKSK
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