| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0741 |
|---|
| Symbol | |
|---|
| ID | 5452901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 804109 |
|---|
| End bp | 805053 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640874488 |
|---|
| Product | CaCA family Na(+)/Ca(+) antiporter |
|---|
| Protein accession | YP_001410253 |
|---|
| Protein GI | 154249428 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000278551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACTGA GCATCTTACT TCTCATAATC GGTTTTGTCT TTGTCTCTAT TGGCTCAGAC
AAATTGGTTG AAGGTGCGTC AACTTTAGCG AAAAAACTAA AGGTTTCTGA TTTATTAATA
GGTCTTACAA TTGTAGCATT TGGTACTTCT GCACCAGAAC TTGCTGTTAA TATCGTTTCG
TCCATTAAAG GAACATCAAA TATAAGCTTA GGAAATGTTA TTGGAAGTAA TATTTTTAAC
ATACTTGTTG TCGTTGGATT ATCAGCTGTG ATAAGACCTG TAATAGTCCA ACATTCTACA
TTGAGAAAAG AAATTCCATT AAGTTTAATA GCAGCACTTT CCATTCTTGC ACTTGGAAAC
AAAACACCAT CTGTTATAAC AAGAGGAGAT GGAATAGTTT TGTTACTATT CTTTGCGATA
TTCATGTCTT ATATCTTGGA AATGGCACAA AAAGACCGTG AAATGTTTGA GGAACTTGAG
AAGACCAAAG AAAAACAATT AGGTACAATT ATCTCTATTC TATACATAAT TGGTGGGCTT
GCAGGTTTGG TTTTTGGCGG TAGATGGATA GTAAACGGCG CAGTTGACAT AGCAAAAGCT
TTTGGTGTCT CAGATAAACT CATAGGATTA ACCATAGTAG CTGCGGGAAC TTCCATTCCT
GAACTTGCAA CATCTTTAGC TGCAATAATA AAAGGCAATA ACGAAATAGC ACTTGGTAAT
GCAGTAGGTT CTAATATATT CAATGTATTC TTCATACTGG GTATATCAGC TGTTATAAAA
CCCATAGTTT ACACAACTGT TTTGAACTTT GACGTAACTT TGCTTGTCAT AATTACTGTA
ATATTGTTAC TATTTTCAAA AAATTTGAAA ATAGAGAAAT TCGAAGGGTT GCTTATGGTA
TCAACTTACG TTGGCTACAC AATTTACTTA ATCTATCGTG GATAA
|
|---|
| Protein sequence | MILSILLLII GFVFVSIGSD KLVEGASTLA KKLKVSDLLI GLTIVAFGTS APELAVNIVS
SIKGTSNISL GNVIGSNIFN ILVVVGLSAV IRPVIVQHST LRKEIPLSLI AALSILALGN
KTPSVITRGD GIVLLLFFAI FMSYILEMAQ KDREMFEELE KTKEKQLGTI ISILYIIGGL
AGLVFGGRWI VNGAVDIAKA FGVSDKLIGL TIVAAGTSIP ELATSLAAII KGNNEIALGN
AVGSNIFNVF FILGISAVIK PIVYTTVLNF DVTLLVIITV ILLLFSKNLK IEKFEGLLMV
STYVGYTIYL IYRG
|
|---|
| |