| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0732 |
|---|
| Symbol | |
|---|
| ID | 5452308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 795343 |
|---|
| End bp | 796548 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640874478 |
|---|
| Product | cofactor-independent phosphoglycerate mutase |
|---|
| Protein accession | YP_001410244 |
|---|
| Protein GI | 154249419 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3635] Predicted phosphoglycerate mutase, AP superfamily |
|---|
| TIGRFAM ID | [TIGR00306] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.17972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAC AAGCATTTGT TCACGAGTTA ATTACGCCAA ACAACAGTAA AATTGTTCTT
CTTGTCATGG ATGGTATCGG TGACCTTCCA AACGAAGAAG GTTTAACACC GCTTATGAAA
GCAAACACAC CAAACTTGGA CAAAGTAGCC ACATTGAGTG ACCTTGGCCA AACTATCCCC
GTTCTTTATG GTATAACACC CGGGAGTGGA CCTGGACACC TTGGTCTTTT TGGTTACGAC
CCAATTAAAT ATCAAATAGG TAGAGGTATT CTTGAGGCAT TAGGAGAAGA CATCGAAGTT
GGAGAACTTG ATGTTGTTGC AAGGGGAAAT TTCGCAACAA TCAACGGAGA TATCGTTGTT
GACAGAAGAG CTGGAAGACC ATCAACTGAA GAAAGTGCAA AAGTTGTGGA GATACTCAAC
GCAAATATTA AAGAAATAGA AGATGTTAAA GTCACATTCT ATCCAGGAAA AGAGCACAGA
TTTGTTCTGA AACTTACAGG CGAAGGTCTA TCAGATAAAA TTGAAGACGC AGACCCACAA
AAAGAAGGAA AACCAATCAA ATACACTTCC GCGCTATCAC CAGAAGCAGA AAAGACAGCA
AGAATTATAA ACAAACTCCT CGATAGAATC AAAGAAGTTC TTAAAGACCA ACAAAAAATG
AACTTCGCAC TTGTAAGGGG ATTCTCAAAA TATCCACAAC TTCCTCAATT TCCAGAAGTT
TACAAACTTA GAGCTGGAGC AATTGCCGTA TATCCAATGT ACAAAGGACT TGCAAAATTA
GTGGGAATGA CAATTATCCC AACAGGTCAA ACGATAGAAG ACGAAATAGA AACACTTAAG
AAGGAATGGA ATAATTACGA CTTCTTCTTT GTACACATTA AAAAGACCGA CTCATACGGA
GAAGATGGTA AATTCGACGA AAAAGTACAC GTAATAGAAA ACGTTGATAA AATAATTCCA
GAGATACTCA GTCTTAATCC GGATGTACTT GTTGTCACAG GTGACCACTC TACACCATGT
GCGATGAAAG GTCACTCATT CCACCCAGTA CCGATAATGT TCTGCGCAAA ATATACAAGA
AGAGGGCTTT CAAAAGCGTT TAACGAATTC GAATGTGCAA GAGGAACAAT AGGTACAATA
CACGCAACAG ACGTTATGAA TCTTATACTC GCATACTCTG GAAGATTGGA AAAATTCGGA
GCATAA
|
|---|
| Protein sequence | MDKQAFVHEL ITPNNSKIVL LVMDGIGDLP NEEGLTPLMK ANTPNLDKVA TLSDLGQTIP
VLYGITPGSG PGHLGLFGYD PIKYQIGRGI LEALGEDIEV GELDVVARGN FATINGDIVV
DRRAGRPSTE ESAKVVEILN ANIKEIEDVK VTFYPGKEHR FVLKLTGEGL SDKIEDADPQ
KEGKPIKYTS ALSPEAEKTA RIINKLLDRI KEVLKDQQKM NFALVRGFSK YPQLPQFPEV
YKLRAGAIAV YPMYKGLAKL VGMTIIPTGQ TIEDEIETLK KEWNNYDFFF VHIKKTDSYG
EDGKFDEKVH VIENVDKIIP EILSLNPDVL VVTGDHSTPC AMKGHSFHPV PIMFCAKYTR
RGLSKAFNEF ECARGTIGTI HATDVMNLIL AYSGRLEKFG A
|
|---|
| |