| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0681 |
|---|
| Symbol | |
|---|
| ID | 5452088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 743744 |
|---|
| End bp | 745162 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640874427 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001410193 |
|---|
| Protein GI | 154249368 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCTG TTGAAGGTCT TGAAAAAGTT GATAAGTACA TTTACAAAAT TCGCAAAGCT
GGAAATATGA GAGTTGACGC GATAATTCTA TCGGATTGGG AAACGTTAGA TAAAGAAGCG
ATAGAACAAA TCAAAAACGT CGCAACTCTT CCAGGTATTT TAAAAGCTGC TTACGCTATG
CCAGATATAC ACTGGGGTTA CGGATTTCCA ATAGGTGGAG TTGCCGCTTT TGATGTTGAA
GATGGAATTA TAAGCCCTGG TGGTGTGGGA TTTGATATAA ACTGCGGAGT TAGGATGCTT
GTCGTAAAAG GTTCAAGTAA TATCGTAAAG AGTAATATCG ATACAATAAT AAAACGCATT
TATGAGAGTG TACCCGTTGG AGTTGGTGAA ACAAGTGAAT TGAATTTTTC AAAAAACGAT
TTCAAAAGGA TAGTCACAAA TGGTGCAAAA GAAGTAATAA AGATGGGATT TGGATACGAC
GAAGATTTGG AAAGAATCGA AGACTACGGC CACATACAAA ATTGTGATTT TTCCGATGTA
AGTGAAGAAG CTATAAAGAG AGGGAAAGAC GAACTTGGGA CGTTGGGTGC GGGAAATCAT
TTCATTGAAA TCCAAGTCGT CGAAGAAGTA TACGATGAGA AAATAGCAAA AGTATTTGGG
TTGGGTAAAG GTGATATAAC GATATTAATC CACACAGGTA GCAGAGGCTT TGGTCATCAA
ATCGCTACAG ATTACATTAA AATCATGAGA GATAACCTTA AAGAACATAA TAAAAATCTC
CCTGATAAAC AGTTGATAAA TGCTCCATTT AATAGCAAAT GGGGGCAGAT GTATTATAGC
GCAATGAACT GTGCGGCAAA TTACGCGTTC GCGAATAGGC AGATTATTAC TCATCTCATT
AGAAAAGTAT TTAAATCTGT TGCGGGATTA GATGTAAAAC TCGTTTACGA TGTAGCGCAT
AACATCGCTA AGATAGAAGA ATATGAAATT GATGGAAAAA AGAGAAAAGT TATTGTACAT
AGGAAAGGCG CGACAAGGGC ATTTGGACCG GGAAACCCAC ACCTTCCAGA AATATTTAAA
GAAACAGGGC AACCAGTTAT AATCCCAGGG AGTATGGGCA CAGCATCGTA CATACTTGCT
GGAACAAAAA AAGCTGAAGA AATGACATTT GGTTCAACTG CTCACGGTGC TGGGAGAACT
TTGGGAAGAA GAGAAGCGAC ACGAGAGCTC TCAGTTGAAC GTGTGATAAG AGAGCTTGAC
AAAAAAGGCG TAAAACTTTT GGCTAAATCA AAAAAAGGCA TAGTTGAGGA AGCACCAGAA
GCATATAAAG ATGTTGATAA AGTAATTAAA GTTGTTGATG AACTCGGTAT ATCACTCAAA
GTTGCAAAGT GCGTTCCTAT CGGAGTGATA AAAGGATGA
|
|---|
| Protein sequence | MSPVEGLEKV DKYIYKIRKA GNMRVDAIIL SDWETLDKEA IEQIKNVATL PGILKAAYAM
PDIHWGYGFP IGGVAAFDVE DGIISPGGVG FDINCGVRML VVKGSSNIVK SNIDTIIKRI
YESVPVGVGE TSELNFSKND FKRIVTNGAK EVIKMGFGYD EDLERIEDYG HIQNCDFSDV
SEEAIKRGKD ELGTLGAGNH FIEIQVVEEV YDEKIAKVFG LGKGDITILI HTGSRGFGHQ
IATDYIKIMR DNLKEHNKNL PDKQLINAPF NSKWGQMYYS AMNCAANYAF ANRQIITHLI
RKVFKSVAGL DVKLVYDVAH NIAKIEEYEI DGKKRKVIVH RKGATRAFGP GNPHLPEIFK
ETGQPVIIPG SMGTASYILA GTKKAEEMTF GSTAHGAGRT LGRREATREL SVERVIRELD
KKGVKLLAKS KKGIVEEAPE AYKDVDKVIK VVDELGISLK VAKCVPIGVI KG
|
|---|
| |