Gene Fnod_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0679 
SymbolcysS 
ID5453229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp740445 
End bp741857 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content38% 
IMG OID640874425 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001410191 
Protein GI154249366 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGG TTTATATAAC AGATACGCTT AGTAAAAGTA AAGTTCCACT TGAGACTTTA 
GAACCTGGCG TCGTAAAGAT GTACGTTTGC GGACCTACTG TATACAATTA CATTCACATA
GGCAACGCAA GACCTATGGT TGTTTTCGAC GCTCTCAGAA GGTTTTTAGA ATTCGTGGGT
TACAGGGTAA TAATGGTTCA AAACTTTACA GATATAGATG ATAAGATAAT AAACGAAGCA
AAAGAATGGA ACGTCGATTG GAAAACAGTT GCGGATACGT TTATCGCAGA GTATTTTCAC
GATGCTCAAC TTTTAGGCGT AAGAGCAGCA AATTACCACC CCAGAACAAC AGATTTTGTT
AAAGATATCG TTGAAGCAAT TGAAACAATG ATAAAAAAAG ATTTCGCATA TCCAGCAGAA
AATGGTGATG TTTATTTCAG CGTTAGGAAA TTAAGAGATT ACGGAAAGCT ATCTGGAAAA
AATTTGGATG ATTTGAGAGC AGGCGCAAGA GTTGATGTGA ATGAACTGAA AAAAGATCCA
CTTGACTTTG TTTTGTGGAA ATCCGCCAAA CCTGGTGAAC CTACGTGGGA CAGTCCGTGG
TGCAACGGTA GGCCAGGTTG GCATATAGAA TGTTCCGTTA TGTCGCAAAA ATTACTTGGT
GATATGTTTG ATATACACGG TGGTGGTGAA GACCTTATCT TCCCACACCA TGAAGATGAA
ATAGCTCAGA GTGAAGCGCT CACAGGTAAA CCACCGGCAA AATACTGGAT GCATAACGGT
ATGATTATCG TACGTGGAGA TAAGATGAGT AAATCCCTTG GAAACACATT CATGGTAAGG
GAAGCGGTAA GAAGGTACAC TAAAGATGGC GTAAAGCTTT TCTTGCTGTC CAAACATTAC
CGTTCACCTA TGGAATTTTC GGACGAGATA CTTCAAGATA ACATGAGAGC AGCTCAAAGG
GTGCATAACG CATTAAACAG ATTCACGGAA AAGTACCCAT ACCCATTGGT ACCAAAAATT
GACGAAGAAA TGGAAAACTT CATAGACAGA TTTGTGGAAG CACTTTCCGA CGATTTCAAC
ACACCAGTTG CACTCTCAAT TTTATTCGAT ACAGTTAAAG AACTTAACAA ATCAATGGAT
GAAGGTAACG ACGAAAGAGC ATTGAAAATG TACCACCTTG TAAAGAGAAT TTATGGTCCT
GTTCTTGGAG TGTTTGACAG TGAAATCCAA AAACAACAGC AAGTAAATTC CGAACAGTTA
GATCAGCTAA TACAAGGTAT AATAAATTTA AGAAATGAAT ACAGAAAGAA TAAACAATTT
GAAATAGCTG ATAAGCTAAG AGACGCACTC TTAAATGCAA AGATAAAATT ACTTGATACT
CCAGAAGGTA CAAAATACGA AATTAATGAT TAA
 
Protein sequence
MTKVYITDTL SKSKVPLETL EPGVVKMYVC GPTVYNYIHI GNARPMVVFD ALRRFLEFVG 
YRVIMVQNFT DIDDKIINEA KEWNVDWKTV ADTFIAEYFH DAQLLGVRAA NYHPRTTDFV
KDIVEAIETM IKKDFAYPAE NGDVYFSVRK LRDYGKLSGK NLDDLRAGAR VDVNELKKDP
LDFVLWKSAK PGEPTWDSPW CNGRPGWHIE CSVMSQKLLG DMFDIHGGGE DLIFPHHEDE
IAQSEALTGK PPAKYWMHNG MIIVRGDKMS KSLGNTFMVR EAVRRYTKDG VKLFLLSKHY
RSPMEFSDEI LQDNMRAAQR VHNALNRFTE KYPYPLVPKI DEEMENFIDR FVEALSDDFN
TPVALSILFD TVKELNKSMD EGNDERALKM YHLVKRIYGP VLGVFDSEIQ KQQQVNSEQL
DQLIQGIINL RNEYRKNKQF EIADKLRDAL LNAKIKLLDT PEGTKYEIND