| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0670 |
|---|
| Symbol | |
|---|
| ID | 5451816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 732914 |
|---|
| End bp | 733876 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640874414 |
|---|
| Product | DNA polymerase III delta |
|---|
| Protein accession | YP_001410182 |
|---|
| Protein GI | 154249357 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.840892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTCT ATTTGACTGG TAATTCAAGA TTTAAAAAGG AACTGTACAT AAAAGATTAC
CTTAATAAAT ATAAGAACTA TCAATATATA AAAATCTTCT CAAACGATGA AGGAAAATTG
GAAGAATTGA AAAACGCTTC GATAAGTCTG GGACTTTTCT CAGAAGGAAA GATATACGAT
CTTGTTGATT TTGATGAATG GTCAAAATCC GAAAAGGAAG AATTCTATAA AATTGAATTC
CCTGACGAAA ATGTAATAGT ATTAGTTAGA ACTGAAAAAG CTATTCAAAA AGATTTGAAG
GATAAGGTAA TCGTTCAAAA TTTTGATAAA CCAAAAGATT GGGAAGATGA AAAATGGTTA
CAATTTATCA TGGATAGCGC CAAGCTTATA GGTGTAGAAA TTTCACAAGA GATAGCACAC
GAATTGTTAG AAATTGTAGG GCCTGACGAA GACACAATAA TTAGCGAGCT TGAGAAAATC
AAAATATACT CACTTGGTAA ACCTCATATC GAAGATATAG AAGATATAAC ATACAAGAGA
ACTGTAAGCA AATTAGACGA ATTTGCTTAC CTTTTGAGCG AAGGAAGGTT AGATGACGCA
AAAAACTTAA TCTTCGAAAT CAGTAATGAA TACGAACCCG TTTTTATTTT ATATGCACTT
AGCAAACATT TTATTGAATT ATTGAATTTA ATAGCAACAG TTGAAAGAAA ACATAAATAC
TCCTGGCCAC AAATAAAAGA AATATCAAAA CAAACAGATA TACCTATTCC TAGAGTGACA
AGGTTTCTCG GATTTAAATT TAAAGACTCA AAATTCTCAC CAATAAACCA TCTTGAAAAA
TATACATTAA AAGAAGTGAA GAATATTCTT GAATACTTGT ATTCAATGGA CAGACAAATA
AAATTAGGTG CCGACCCAAA AGTTGTCTTA GCGAATTTTA TAACCTATTT GAAAAATCTG
TAA
|
|---|
| Protein sequence | MVVYLTGNSR FKKELYIKDY LNKYKNYQYI KIFSNDEGKL EELKNASISL GLFSEGKIYD
LVDFDEWSKS EKEEFYKIEF PDENVIVLVR TEKAIQKDLK DKVIVQNFDK PKDWEDEKWL
QFIMDSAKLI GVEISQEIAH ELLEIVGPDE DTIISELEKI KIYSLGKPHI EDIEDITYKR
TVSKLDEFAY LLSEGRLDDA KNLIFEISNE YEPVFILYAL SKHFIELLNL IATVERKHKY
SWPQIKEISK QTDIPIPRVT RFLGFKFKDS KFSPINHLEK YTLKEVKNIL EYLYSMDRQI
KLGADPKVVL ANFITYLKNL
|
|---|
| |