| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0649 |
|---|
| Symbol | trmD |
|---|
| ID | 5452463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 712802 |
|---|
| End bp | 713542 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640874390 |
|---|
| Product | tRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_001410161 |
|---|
| Protein GI | 154249336 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAATTG GCATCCTAAC CATTTTTCCG GATTTTGTGA AAGTTATCAA AGAGTACGGA
GTTATAGCAC AAGCCGTTGA AAATAACCTT TTGCAAATCG ATATATTCAA TCTAAGAGAT
TTCACCACAG ATAAGCACAA GGTCGTCGAC GATTACGCCT ATGGCGGCGG ACCTGGAATG
GTTATGAAAC CAGAACCATT TTTTAAATTT TTCGAGTATT ACAATCAAAT GTTTGGTAAA
CCTTACGTAG TACTGACATC ACCGCAGGGT AAAACGTTAA ATAACGAAAT AGCAAAGAAA
TTATCAGCTC AAGAAAGATT GTTAATCATC TGTGGAAGAT ACGAAGGCAT CGATGAACGC
GTTATGAAGT TCGTTGATGA AGAAATTTCA ATTGGAGATT ACGTCCTCAC AGGTGGCGAA
CTACCAGCAA TGGTTATTAC AGACGTGGTA TCGAGATTTA TACCGGGTGT GGTAGAAGAG
GAGTCTGTTA AAAACGATTC TTTCTACAAC GATTTATTAG ACCACCCACA CTATACAAGA
CCAAGAAACA TAGACGGTTT GGAAGTTCCT GAAGTGCTTC TTAGTGGTAA CCATGAAGAA
ATCGAATTGT GGCGAAGAAA AGAGTCTTTA AGAAAGACTA TATCTAAAAG GCCTGATTTA
TTTTTAAAGC ACCAATTTGA TGAAGTTGAT AAGAAAGCAC TTCTTTTACT CTTTAAGGAG
CTGATAAAAG ATGCTAAATA A
|
|---|
| Protein sequence | MRIGILTIFP DFVKVIKEYG VIAQAVENNL LQIDIFNLRD FTTDKHKVVD DYAYGGGPGM
VMKPEPFFKF FEYYNQMFGK PYVVLTSPQG KTLNNEIAKK LSAQERLLII CGRYEGIDER
VMKFVDEEIS IGDYVLTGGE LPAMVITDVV SRFIPGVVEE ESVKNDSFYN DLLDHPHYTR
PRNIDGLEVP EVLLSGNHEE IELWRRKESL RKTISKRPDL FLKHQFDEVD KKALLLLFKE
LIKDAK
|
|---|
| |