| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0646 |
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| Symbol | rpsP |
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| ID | 5451799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 711735 |
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| End bp | 712007 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874387 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_001410158 |
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| Protein GI | 154249333 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.151605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTAAGGA TTAGGCTTAC ACGCATGGGA AAAAAGAAAC AACCATTTTA CAGGATAGTT
GTCGTTGATC AGAAGAAGAA AAGAGATGGT GCTTACGTCG AAAGTTTAGG TTACTACAAC
CCACTTAAGG AACCTTACGA GGTAAAAGTT GACATCGACA GGGCAGTTGA ATGGATGCTT
AAAGGTGCTC AACCAAGTGA AACAGTTTCA AAACTCCTTG GTAAGCTTGG ATTATACGAA
AAATTAGAAG AAGCAAAATC TAAAAAGGCT TGA
|
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| Protein sequence | MVRIRLTRMG KKKQPFYRIV VVDQKKKRDG AYVESLGYYN PLKEPYEVKV DIDRAVEWML
KGAQPSETVS KLLGKLGLYE KLEEAKSKKA
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