Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0639 |
Symbol | ushA |
ID | 5451537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 702196 |
End bp | 703725 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640874380 |
Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
Protein accession | YP_001410151 |
Protein GI | 154249326 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.38757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TTCTGATAGT TCTTTTGTTA GTTCTTTTGA GCTTATTTGC ATTTGCGGTT AAGATTACTG TTTTCCACAT TAACGACACC CACGGTCACG CATGGTCATT TACAGATTCT GCAGGTAATA TAATCGGTGG ATTTGCAACG GTTGCATCTA TTATCGATGC AGAAAGAAGT GTCAATCCTA ACGTAATTTT CTTACATGCT GGCGATATCA ACACAGGTGT TCCTGAGTCA GACTTAATGA ACGCTATACC GGATATATTT GCACTTAACA GAATGAGATT GGCAGCTGCA ACAGTTGGCA ACCATGAATT TGATAAACCA AGAGATGTGT TAATGAAACA AATATCATGG GCAAAATTCC CATTCTTAAG TGCAAATATC TATAAAGATG GAAAGCCACT CTTTACGCCT TATATCATAA AGGAAGTTGG CGGGGTTAAG GTAGCAATCG TTGGTTTCAC AACAGAACAC ACGAAGATAT TGGAGGGACC AAACTCTGAA GATCTCGAAT TTAAAAATGT TATAGAAGTT GCTAAACAAT TAATTCCTGA ATTGAAAAAA CAAGCAAATG TTGTTATTGC TTTAACGCAC CTCGGTGTTG GACAAGGTTA CTCTGAACTT TACACAACAG CCGATCAACT TGCGAAAGAA GTTGAAGGAA TTGATTTAAT TATCGATGGT CACAGCCACA CTCAAATGAC ACAACCGATG GTTGTAAATG GTGTACCAAT TGTTCAAGCG TTTGAATGGG CAAAGGTATT GGGAAGAGCT GATATCGAAG TTGAAAATGG AAAAGTTGTA AAAATAGACT GGCAAGCTAT ACCGGTAATT CAATCAAAAG TTGTTGGAAA AGATGAATCA GGGAAGAATA TCTACCAAGT TGTTACAAAA GAAGCTTTGT ACGTTAAGAC ACCGCTCGAT TACTTCAAAA AACTCGGTGG TGCAAAACTT GACACAGTTA TAGGAACAAC AGAGATATTA TTAGACGGTG AAAGAGCAAA CGTTAGATCA AAAACAACAA ACCTTGCAAA CCTTATAGCT GATTCCATGA TTTGGAAAAC GGGTGCTGAT GTTGCTTTGA CAAACGGTGG AGGAATTAGA GCATCAATAA AACAAGGTAA TATAACAATA AGAGACGTGC TTACGGTTCT TCCATTTGGA AACACTCTCT ATGTGCTTGA AATGAAAGGT TCTGACTTAA TAAAGGTATT TGAATATGCT GCAACTGTAC CAAATGGCCA AGGTGCGTTC CTACAAGTTG CTGGCGCAAC ATGGAAATCA GAAAGTGGAA AATTAACAGA AGTGCTTGTT GGTGGGAAAC CAATAGACCC AGAAAAAGTC TATAAAGTTG TTACAAATGA CTATATGGCA GCTGGTGGAG ACGGTTACTC CATGTTGAAA GGTCAAAAAG GTTACAACAC ATTCTACGTA ATGGCAGATG TTGTTGTTGA GTATATCCAA AAAGCGTTGG GTGGAAAAAT AACATCTTAC GATGACAAAC CAAGAGTGGA AAGAAAGTAA
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Protein sequence | MKKFLIVLLL VLLSLFAFAV KITVFHINDT HGHAWSFTDS AGNIIGGFAT VASIIDAERS VNPNVIFLHA GDINTGVPES DLMNAIPDIF ALNRMRLAAA TVGNHEFDKP RDVLMKQISW AKFPFLSANI YKDGKPLFTP YIIKEVGGVK VAIVGFTTEH TKILEGPNSE DLEFKNVIEV AKQLIPELKK QANVVIALTH LGVGQGYSEL YTTADQLAKE VEGIDLIIDG HSHTQMTQPM VVNGVPIVQA FEWAKVLGRA DIEVENGKVV KIDWQAIPVI QSKVVGKDES GKNIYQVVTK EALYVKTPLD YFKKLGGAKL DTVIGTTEIL LDGERANVRS KTTNLANLIA DSMIWKTGAD VALTNGGGIR ASIKQGNITI RDVLTVLPFG NTLYVLEMKG SDLIKVFEYA ATVPNGQGAF LQVAGATWKS ESGKLTEVLV GGKPIDPEKV YKVVTNDYMA AGGDGYSMLK GQKGYNTFYV MADVVVEYIQ KALGGKITSY DDKPRVERK
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