Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0637 |
Symbol | |
ID | 5452804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 701007 |
End bp | 701531 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874378 |
Product | isochorismatase hydrolase |
Protein accession | YP_001410149 |
Protein GI | 154249324 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.553614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCTT TACTCATAGT TGATTTACAA AATGATTTTG CTAAACCAGG CGGTGCTTTG TATTTTCCAG GTGCAGAGAA TGTTATTCCT AACATAGTTA AGATCGTCGA AGAATTCAAA GCACAGAATT TACCGATAAT TTACACAAAA GATTGGCACG AAGATAACGA TTACGAATTC TCCATTTGGG GAGTGCATTG TTTACACGAT ACCCATGGTA GCGAAATAGT TGATGAACTT AAAAAAGCGC TCGAAGATTA TCAGAACAAA TACGAAATCA AAAAGAGCAG ATACTCTGGT TTTTACGGCA CAAATCTTGA TGAACTGCTC AAAAAGTTAG GCGTAACTGA GGTTCACGTT GGAGGATTGG TAACCCATAT ATGCGTTTTG TTTACCGTTG AAGAGTTGAG AAATAGAGGT ATTGAGACAA TAGTTCATTC AAATTGTGTG GATAGTTTTG ATAAATCAAT GCACGAATTC GCACTTAGAG AAATGAAAGA GGTTTTGCTA GCAAAGGTTA TCTAA
|
Protein sequence | MKALLIVDLQ NDFAKPGGAL YFPGAENVIP NIVKIVEEFK AQNLPIIYTK DWHEDNDYEF SIWGVHCLHD THGSEIVDEL KKALEDYQNK YEIKKSRYSG FYGTNLDELL KKLGVTEVHV GGLVTHICVL FTVEELRNRG IETIVHSNCV DSFDKSMHEF ALREMKEVLL AKVI
|
| |