| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0636 |
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| Symbol | |
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| ID | 5452877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 699047 |
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| End bp | 700762 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874377 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001410148 |
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| Protein GI | 154249323 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0067613 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTACA TGGTAAACAC GGGAAGTGTA TTAGACGAAA CAAAAAACTA CGAGAGATTT
GAAGATTTTG GCTTGAGTGA AGAAATTCTC TTGGCTATTC AAAAGAAAGG CTATGAAAAA
CCCACGGAAA TACAAAAAAT TGTTTTACCT TACGCTTTAT CAACTGATAA GGATTTGATA
GCTCAAGCAC AAACAGGAAC AGGTAAAACG GCAGCATTTG GAATACCTTT GCTTGAAAGG
ATAGATTTCA AGGCAAACAA ATTTGTAAAG GCTATAATAG TTACACCTAC GCGCGAATTA
GCGTTGCAAA TCTTCGAAGA ACTGAAAAGT TTGAAAGGTA CCAAACGAGT TAAAATAACA
ACACTTTACG GTGGTCAATC ACTTGAAAAG CAATTCAAAG ACCTTGAAAA AGGTGTTGAT
ATAGTAGTTG GCACACCGGG TAGAATTATA GACCACCTAA ATCGTGACAC TCTTGACCTT
TCACATGTGG AATATCTTGT CCTTGATGAA GCCGATAGAA TGCTTGACAT GGGATTTTTA
GATGATGTAC TTGAAATAAT TAAGAGAACT GGCGAAAATA AGAGAACATT TCTTTTTTCT
GCGACGATGC CAAAAGAAAT AGTTGATATA GCAAGAAAAT TCATGAAAGA ATATATACAC
GTATCAACGG TTAAAGATGA ACTTACGACA GAAAATGCGG AGCAACTTTA CTTTGAAGTC
GATGAAAAGG ATAAATTGCC ATTACTCTGC AGAATTATCG ACATGAATCC AGATTTTTAC
GGTATCGTTT TTTGCCAGAC AAAATTAGAA GTTGATGAAA TATCCAAAAA ACTCTTGGAC
CTTGGTTACA ATGCAGATGG TCTCCATGGT GATTACTCTC AATACCAAAG AGAAAGAGTA
CTTGATAAAT TTAGAAAAAA GCAATTGAGA ATATTAGTCA CGACAGATGT GGCAGCTCGT
GGTATTGATA TTGATGGGCT GACGCATGTT ATAAATTATT CTGTTCCAAG AGATCCTGAG
TATTACGTAC ACAGAATTGG AAGAACTGGA AGAGCTGGAA AAAAAGGTTT TGCTATCACA
TTCGTCACAA GAGATGATTA CTTCCACTTT GCGAGAGTTA AGAGATTTGC TAAGGCAAAG
ATAATCAAAG ATTCAATCCC GCAGGTTGAA GACATACTTA ACAGGCAACT TGAAAAACTT
TTAGATACTT TAAAAAATGC ACCAAAAGTT TCAAACGAAC TTTACAAAAG AGCAGCTCAA
CAAATTATCG AGGAAATGGG ACCAACTGAA GCTGTTGAAA TGCTTCTCCA TACTTTGATA
AAAGATAAGA TAGATGTATC AAGGTATGGT GATGTAAAAC CGAAGAACTT TTCTAAAGGA
AGAGAACAAA ATTTTGGGGA TTCAAACAAA AATGTTGATT CTGGAAGTGT AAGATTATTC
GTAAATATGG GCAGTTCAAA AGGACTAGAT AAGAAAAAGC TTGTAGAGTT CATATCTGAA
AGAACGGGTG TTGAGCCATC TAATATCAAC AATGTAAAAG TCTTTGAAAA TTTCTCTTTC
ATAGATGTAA GTGAATTTGA CGCAGAAGTT ATATTGAAGA CATTAAATCC AAAAAGGGGT
AAAAATTCAC GCTCTAAACC TCTCGTTGAA AGAGCGAGGG AAAAAAGAGA AAATAGGGAA
AATAGAGAAA GCAAAGAAAG AAAATCAAGA ACTTAA
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| Protein sequence | MKYMVNTGSV LDETKNYERF EDFGLSEEIL LAIQKKGYEK PTEIQKIVLP YALSTDKDLI
AQAQTGTGKT AAFGIPLLER IDFKANKFVK AIIVTPTREL ALQIFEELKS LKGTKRVKIT
TLYGGQSLEK QFKDLEKGVD IVVGTPGRII DHLNRDTLDL SHVEYLVLDE ADRMLDMGFL
DDVLEIIKRT GENKRTFLFS ATMPKEIVDI ARKFMKEYIH VSTVKDELTT ENAEQLYFEV
DEKDKLPLLC RIIDMNPDFY GIVFCQTKLE VDEISKKLLD LGYNADGLHG DYSQYQRERV
LDKFRKKQLR ILVTTDVAAR GIDIDGLTHV INYSVPRDPE YYVHRIGRTG RAGKKGFAIT
FVTRDDYFHF ARVKRFAKAK IIKDSIPQVE DILNRQLEKL LDTLKNAPKV SNELYKRAAQ
QIIEEMGPTE AVEMLLHTLI KDKIDVSRYG DVKPKNFSKG REQNFGDSNK NVDSGSVRLF
VNMGSSKGLD KKKLVEFISE RTGVEPSNIN NVKVFENFSF IDVSEFDAEV ILKTLNPKRG
KNSRSKPLVE RAREKRENRE NRESKERKSR T
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