| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0632 |
|---|
| Symbol | |
|---|
| ID | 5451815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 696113 |
|---|
| End bp | 696706 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640874373 |
|---|
| Product | RnfA-Nqr electron transport subunit |
|---|
| Protein accession | YP_001410144 |
|---|
| Protein GI | 154249319 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
|---|
| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit
[TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0279309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACCTG ATATAAATCC CTTTGTATTG TTCTTTGCAT CGATTTTTAC AAGTAATATT
CTTCTTACGA ATTTTCTTGG AATGTGTTCG TTTATATCAA TTTCGAAGGA TATAAAGTCT
TCTAACGGCT TAGGTTTAGC GGTAACGCTT GTAATGACGA TAACAACAGC CATAAATTGG
ATTATCGAAA AATACGTTAT AGCACCGTTG GATTTAGGTT ACTTAAGGTA TATACTTTAC
ATCATCGTCA TAGCCGCTGT TGTACAAGTG CTTGAGATGA TAATTGACAG AGTTTCTCCG
AATCTATATA TGGTTCTCGG TATCTTCCTT CCGCTGATTA CCGTTAACTG TGCAATACTT
GGTGTAGCTT TGTTCATGCA ATTGAGAAAT TATACGTTCT TGCAATCTGT ATTTTTTGGG
CTTGGCAGTG GCATGGGTTG GTGGCTCGCC ATTGTTTTAC TTGCGGCAAT TAGAAAAAAG
ACGGAAAATG CTCCCGTTCC AGCACCGCTT AAAGGCGTTG GAATTACACT TATCACAATT
GGCATTATGG CAATGGCTTT CATAGGTTTC GCTGGAATGA TTAAAGTACA ATAG
|
|---|
| Protein sequence | MVPDINPFVL FFASIFTSNI LLTNFLGMCS FISISKDIKS SNGLGLAVTL VMTITTAINW
IIEKYVIAPL DLGYLRYILY IIVIAAVVQV LEMIIDRVSP NLYMVLGIFL PLITVNCAIL
GVALFMQLRN YTFLQSVFFG LGSGMGWWLA IVLLAAIRKK TENAPVPAPL KGVGITLITI
GIMAMAFIGF AGMIKVQ
|
|---|
| |