| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0611 |
|---|
| Symbol | |
|---|
| ID | 5452506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 679087 |
|---|
| End bp | 679986 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640874352 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_001410123 |
|---|
| Protein GI | 154249298 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000665754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAG CATTCTTATT TCCTGGTCAA GGGTCTCAAT ACAGTGGAAT GGCAAGTGAA
TTTTCGAAAT ACGCGTCTTG GGAATATTAC GCTCAAAAAG CGATAGAAGT TTTAGGTTTT
GACATAACGG AGATAATGGA TGGAGACGAA GAGATACTAA AGATTACTGA GAATGCTCAA
CCTGCGATAT TCTTGGCAAG TTACGTAGCA TATGTTGAAA CAACAAAAAA AGGTTTGGAA
CCAGATTACG TTGCAGGGCA CAGTCTAGGT GAGTACACCG CTCTTGCGGC TGCTGGAGTG
TACGACTTTG AGACAGGCAT ATATCTAGTT AGAAAAAGAG GAGAATACAT CTCTCAAACG
ATGAAACCCG GCGAAGGTAG CATGGCAGCG GTTATGGGGG TGCCTATCGA ATTGCTCGAA
GAATTCGTAA AACAATACGA TGGACTTTAC ATAGCAAATT ACAATTCAGC AGAACAGAAT
GTTGTAAGTG GAAAAGCTGA TAGTATAAAA TCATTTGTCG CTAACCTCAC CGAAAAAGGT
TACAGGGCAA TTGAATTAAA AGTCTCCGGT CCGTTCCATA CACCATTTTT AGATGAAGCA
AGAGAGAAAA TGGCAAAAGA AGTTGAAAAT ATCAAATTCA AAACACCGAA ATATCCTATA
ATCATGAACA GCATAGCAAA AGAACTAACA GACCCAGACA AGATAAAGCA TTATTTGCTT
GAACAGATAA GTGGCCCAGT TTATTGGAAA CAATCTATCG ACAGAATGCT TGAACTTGGT
GTCGATGAAT TCATAGAAGT CGGTCCAAAA AACGTCTTGA GTTCTATGCT AAAAAAAGCT
AAAATTAATA CAAAACACTT CTCATCTTTA ATAACTACAG AGGAGGTTTA CGAAAAATGA
|
|---|
| Protein sequence | MLKAFLFPGQ GSQYSGMASE FSKYASWEYY AQKAIEVLGF DITEIMDGDE EILKITENAQ
PAIFLASYVA YVETTKKGLE PDYVAGHSLG EYTALAAAGV YDFETGIYLV RKRGEYISQT
MKPGEGSMAA VMGVPIELLE EFVKQYDGLY IANYNSAEQN VVSGKADSIK SFVANLTEKG
YRAIELKVSG PFHTPFLDEA REKMAKEVEN IKFKTPKYPI IMNSIAKELT DPDKIKHYLL
EQISGPVYWK QSIDRMLELG VDEFIEVGPK NVLSSMLKKA KINTKHFSSL ITTEEVYEK
|
|---|
| |