Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0609 |
Symbol | |
ID | 5453300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 677881 |
End bp | 678579 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640874350 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001410121 |
Protein GI | 154249296 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000037264 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGC TTGAAGGGAA AGTTGCGATT GTAACGGGGG CTTCTGGTGG GATAGGAAGA GCTATAACAA AGGAATTAAC GGAGGAAGGC TGCACAGTTA TTGGGTTTAA CTATGTACCT TCTAACGAAG GGATAGAGTA CGTTTTGGAT ATCACAAATC GTCAAGCTGT TGAAGAAGCT GTTAAAGATG TAATTGGAAA GTATGGAAGA ATAGATATAC TTATAAACAA CGCAGGTATC ACAAAGGATA ACCTGGTTTA TCGAATGAGC TATGAAGATT GGGATGCAGT TATAAACACA AACCTTACAG GTGCATTCAA CATGGTTAAA GCGTGCATTA GAGAGATCGT CAAGAACGAA GGTGTGATAA TAAATGTTTC ATCTGTTGTT GGGCTCGAAG GAAACATCGG GCAAGTGAAT TACTCCGCTT CAAAAGCAGG GCTTGTTGGA CTTACGAAAT CTTTGGCGAA AGAATTTGGA AGGAAGAATG TCAGAGTCAA CGCGATAGCC CCTGGGTTTA TCGAAACACC TATGACCGAA AAACTTCCGG AAGAAATTAA AAAAGCAGCG CTTGAAAAAA TATCTATGCG CCGATTTGGT AAACCTGAAG AAGTGGCAAA ACTTGTTAGA TTCCTTGTAA CTGATGGAAC GTACATAAAC GGTCAAGTTA TAGTGATAGA TGGCGGAATG GAAATGTGA
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Protein sequence | MKKLEGKVAI VTGASGGIGR AITKELTEEG CTVIGFNYVP SNEGIEYVLD ITNRQAVEEA VKDVIGKYGR IDILINNAGI TKDNLVYRMS YEDWDAVINT NLTGAFNMVK ACIREIVKNE GVIINVSSVV GLEGNIGQVN YSASKAGLVG LTKSLAKEFG RKNVRVNAIA PGFIETPMTE KLPEEIKKAA LEKISMRRFG KPEEVAKLVR FLVTDGTYIN GQVIVIDGGM EM
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