Gene Fnod_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0609 
Symbol 
ID5453300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp677881 
End bp678579 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content40% 
IMG OID640874350 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001410121 
Protein GI154249296 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000037264 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC TTGAAGGGAA AGTTGCGATT GTAACGGGGG CTTCTGGTGG GATAGGAAGA 
GCTATAACAA AGGAATTAAC GGAGGAAGGC TGCACAGTTA TTGGGTTTAA CTATGTACCT
TCTAACGAAG GGATAGAGTA CGTTTTGGAT ATCACAAATC GTCAAGCTGT TGAAGAAGCT
GTTAAAGATG TAATTGGAAA GTATGGAAGA ATAGATATAC TTATAAACAA CGCAGGTATC
ACAAAGGATA ACCTGGTTTA TCGAATGAGC TATGAAGATT GGGATGCAGT TATAAACACA
AACCTTACAG GTGCATTCAA CATGGTTAAA GCGTGCATTA GAGAGATCGT CAAGAACGAA
GGTGTGATAA TAAATGTTTC ATCTGTTGTT GGGCTCGAAG GAAACATCGG GCAAGTGAAT
TACTCCGCTT CAAAAGCAGG GCTTGTTGGA CTTACGAAAT CTTTGGCGAA AGAATTTGGA
AGGAAGAATG TCAGAGTCAA CGCGATAGCC CCTGGGTTTA TCGAAACACC TATGACCGAA
AAACTTCCGG AAGAAATTAA AAAAGCAGCG CTTGAAAAAA TATCTATGCG CCGATTTGGT
AAACCTGAAG AAGTGGCAAA ACTTGTTAGA TTCCTTGTAA CTGATGGAAC GTACATAAAC
GGTCAAGTTA TAGTGATAGA TGGCGGAATG GAAATGTGA
 
Protein sequence
MKKLEGKVAI VTGASGGIGR AITKELTEEG CTVIGFNYVP SNEGIEYVLD ITNRQAVEEA 
VKDVIGKYGR IDILINNAGI TKDNLVYRMS YEDWDAVINT NLTGAFNMVK ACIREIVKNE
GVIINVSSVV GLEGNIGQVN YSASKAGLVG LTKSLAKEFG RKNVRVNAIA PGFIETPMTE
KLPEEIKKAA LEKISMRRFG KPEEVAKLVR FLVTDGTYIN GQVIVIDGGM EM