| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0596 |
|---|
| Symbol | |
|---|
| ID | 5453038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 663807 |
|---|
| End bp | 665231 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640874337 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001410108 |
|---|
| Protein GI | 154249283 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000817529 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAGA TATTGATAGT TGACGATAGT AAGTTTTGGA GGCTTGTGTT GGAGAATATT
TTCAAAAGTC GTGGCTATGA AGTTATCGTA ACGGAAGACG CGACAAAGGC TATAGAAATT
GCTTTGAAAG AATATCCTGA TGTTATCATA AGCGATTACA ATATGCCTGG TATTTCTGGT
TTGCAGCTTT GCCTTTACTT AAGGTCAATC CCTGCATTTT CAAATGCAGG GATTGCTGTC
TTAACAGGTT CAGATGATGT TATAAACCAA TTTTGGGCGG AGCATAGTGG GGCAAATAAA
TTTATATCAA AATTACTCAC GAAAGACGAA CTCGAAAGAG TTTTGTTAGA ATTTGTCAAT
GGTGATTTTC GAGCAAATAA AAATGAGAAG AGTATGGTTG TAAATAATAT ATACGATGTG
CTCGAGCAAA AGATGAGAAA AGAGATACTA AACAGGGAAG TTTTGTCGTT AATTCAATTT
GCACGCGATG AATACTTTGT AATAAAAGAA TTAAAAGAGT TTTTGAAAAA TTTTTCTTCT
TTTGACTCTA TCGCTTTTTT ACTTATCTCA CCAGTTGCCG GTCGTGTATA TAACTTCGGT
TTTAATCTGC AAAGGGAATT TTTGAAAAAT TACCTTGTTA GGATTTTGGA AAAACCGACA
GAACCAGCTA ATTGGAATTA TGTTGGTGAA TTCGGCGCCG AAATCTTCGT AAAGGAAGAA
ATTACGCACT TCATTCTGAA ATACGGCGAA AATGAGGTGG GAATAATCGC CGCATCGAAT
GTTTCTGACA GAAGAAATTT GTCAAAGGTG ATTTACGATG CAAACGAAAG CGTCTCACTT
TTGTTTAATA CTCTTAATAC GTTCACAGAA TTTAAGGTCG CCTCAACCGT TGATGGTTTG
ACAGGTCTTT TCAACAAGAA AGAGTTATTG AGATTTTTGG AAGAGACACA CAATTTGTCC
AAGTATAATA AAAAGCCTTA TTACGTTGCG ATGTTTGATT TAGATAATTT CAAGAAAATA
AACGACACAT ACGGACATTT AGTTGGGGAT GAGGTACTTA AAATTTTAGG AAAAATATTG
AAAGAGGCTG TTGGAGATAA AGGTATAGCT GGAAGATACG GCGGAGAAGA GTTCACGTTG
ATTTTAACTA AAATAGAAAA AGATGAGGTT GTGGATTTTA TTGAGGAAAT CTTACAAAAA
GTAAGGACCG CCGAGTTTCC ACACGGAAAA TGCACGGTCT CATGTGGTGT TGTAAGTTCT
GAAAACTATC AATCACCTAC TGAGGTACTG AAAGCAGCAG ATGAGCTTTT GTACATCGCT
AAGAAATCTG GGAAGGATAG AGCGACGTAT ATGTTTTTAC CAACGGATAA AGAGATTAAA
AAAATAATGG ACGTTATCCC AACAGAACAT CAAGCGCAGA CATAA
|
|---|
| Protein sequence | MKKILIVDDS KFWRLVLENI FKSRGYEVIV TEDATKAIEI ALKEYPDVII SDYNMPGISG
LQLCLYLRSI PAFSNAGIAV LTGSDDVINQ FWAEHSGANK FISKLLTKDE LERVLLEFVN
GDFRANKNEK SMVVNNIYDV LEQKMRKEIL NREVLSLIQF ARDEYFVIKE LKEFLKNFSS
FDSIAFLLIS PVAGRVYNFG FNLQREFLKN YLVRILEKPT EPANWNYVGE FGAEIFVKEE
ITHFILKYGE NEVGIIAASN VSDRRNLSKV IYDANESVSL LFNTLNTFTE FKVASTVDGL
TGLFNKKELL RFLEETHNLS KYNKKPYYVA MFDLDNFKKI NDTYGHLVGD EVLKILGKIL
KEAVGDKGIA GRYGGEEFTL ILTKIEKDEV VDFIEEILQK VRTAEFPHGK CTVSCGVVSS
ENYQSPTEVL KAADELLYIA KKSGKDRATY MFLPTDKEIK KIMDVIPTEH QAQT
|
|---|
| |