| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0588 |
|---|
| Symbol | |
|---|
| ID | 5451964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 653523 |
|---|
| End bp | 654995 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640874331 |
|---|
| Product | carboxypeptidase Taq |
|---|
| Protein accession | YP_001410102 |
|---|
| Protein GI | 154249277 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2317] Zn-dependent carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.557389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAC TTAAAGATTA CTATCGAAAA ATCGCGAAAT ACTCAAGTGC CTCTGCTTTA
TTGTACTGGG ACATGCAAAC GTACATGCCA CCACACGCAG GACCTTACAG AGCGCAGGTC
ATATCCGAGA TTAGCTCATA TGCTTTCAAA ATGTCCATCG ACGATGTTCT TGGAAAAATG
CTAAACGAGG CAAACCCTGA AAATGACATA GACAGAGCTA TAATAAAAGT TGGTAAAAAA
GATTACGAAA AATACAAAAA AATCCCACCG GAGTTATTCG AGGAAACAAT GAGAACAGCG
ACGATATCCG AACAAGAGTG GCAATACGCA AAACCAACGG GTGATTTTTC AAAAGTCAAA
GCTAACCTTG AAAAATTAGT TGAATTGAAC AGAAAAATCG CAGACATACT CGGCTATGAG
GACGAACCAT ACGACGCACT TCTAGACCAA TTCGAACCCG GTATGAAAGC AAAGAAAATA
GAGAAGATAT TCACACCATT GAGAGAATTC ACTATACAAA CACTGGAGAA GATAGAAAAA
GAAGGGAAAA ATCCACCGTT GGTGAACCCA AAAATTGCCG TAGAAAAACA GAAAAAATTC
AGCGAGGAAC TTATAAAATA TTTAAAATAC GATTTAAACA AAGGACGACT TGATGTATCC
GCTCACCCAT TTACCAATCC GATAGGTTTA AACGATGTGA GAATTACGAC AAGGTATATA
GAAGACGATG TGAAAAATTC AATTTACTCA ACAATCCACG AATTTGGTCA TGCGCTTTAC
GCACTCTCTA TTCCAGAAGA ATTTTACAGT TTACCGATAG GTTCAAGTGC CTCGTACGGT
TTCGACGAAA GCCAATCGAG ATTTTGGGAA AACGTCCTTG GACGTAGCCT TGCATTTTGG
AAAGGCATAT ACAAAAATGG AATAATCGAT GTTCTTCCAG AACTCAAAGA ACACACCGTT
GAAGACATCT GGCGCTGGGT TAACGAAGTT AAAAGGTCAT ACATCAGAAC GGAAGCTGAT
GAAATCACTT ACAACTTGCA CATAATCTTG AGATTCGAAA TAGAACGCGC ACTAATAAAC
GGTCAACTCC AAGTAAAAGA TCTACCAGAC ATCTGGAATG AACTATTTGA AAAATACATA
GGCTTAAAAG TGCAATCAAA CACAATAGGT TGCATGCAAG ATCCACATTG GTACGGTGGT
TCATTTGGTT ACTTCCCAAC ATACTCACTC GGCAACATAT ACGCCGCACA GATATACCAA
AAATTGAGAG AAGAAATAGA ATTTGAAAAA CTCTTAGAAG AAGGCAACTT CGAGCCAATA
AAACAATGGC TAAGCGAAAA AATATACTCA AAAGGAAGAA TTTACGAACC AGAAGAACTA
ATGACATTGG TAACTGGCAA TCCTCCAAGC GTCGAACCAT TCATGAACTA CATCAAAGAA
AAGTACTCAA AAGTATACGA AATATCATTA TAA
|
|---|
| Protein sequence | MEELKDYYRK IAKYSSASAL LYWDMQTYMP PHAGPYRAQV ISEISSYAFK MSIDDVLGKM
LNEANPENDI DRAIIKVGKK DYEKYKKIPP ELFEETMRTA TISEQEWQYA KPTGDFSKVK
ANLEKLVELN RKIADILGYE DEPYDALLDQ FEPGMKAKKI EKIFTPLREF TIQTLEKIEK
EGKNPPLVNP KIAVEKQKKF SEELIKYLKY DLNKGRLDVS AHPFTNPIGL NDVRITTRYI
EDDVKNSIYS TIHEFGHALY ALSIPEEFYS LPIGSSASYG FDESQSRFWE NVLGRSLAFW
KGIYKNGIID VLPELKEHTV EDIWRWVNEV KRSYIRTEAD EITYNLHIIL RFEIERALIN
GQLQVKDLPD IWNELFEKYI GLKVQSNTIG CMQDPHWYGG SFGYFPTYSL GNIYAAQIYQ
KLREEIEFEK LLEEGNFEPI KQWLSEKIYS KGRIYEPEEL MTLVTGNPPS VEPFMNYIKE
KYSKVYEISL
|
|---|
| |