| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0586 |
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| Symbol | |
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| ID | 5452231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 650438 |
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| End bp | 651877 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874329 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001410100 |
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| Protein GI | 154249275 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.532649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGAGTT ATCCAATTTA TCCAACTTAT CCAACGCCTT ACTGGGCCTT CGAGAGTGTT
GTGTACGAAA TTTTTCCAGA TAGATTCGCT ATTGGTAAAG GAAAGAGCAT TAAAGATAAA
GCTCATTTAT ACAAAGATGG CATTTTAAAA GATTGGGATG AACCACCTGT AAGTACTGGT
GATGGGAAGC AAAATAAGTG GTTTTACGGT GGAGATTTGT GGGGAATTGC GGAGAAAGTT
GGTTATTTAA AAGAGTTGGC TATTAATGCA GTTTATTTAA CTCCCATATT TAAATCTCCA
TCTAATCACA AGTACGATGC TGTTGATTAT TTTAAAGTCG ATAGTCAATT CGGCGGGATG
AACGCGTTTA AAAGTTTGTT GAAGAGTTTG AAAAGTAATA ATATAAGGCT AATTTTGGAT
GGTGTTTTCA ATCATGTGAG TTCTCAGCAC CCGTGGTTTT TGAAAGCGAA AAGGTGGATG
AGAGATTACG TAAGTAGGTT TTCTATATAC GAAGATGGAC ATAGGGGATG GTGGGGAATC
AGGTCTTTAC CGGAATTTCA CCTTGAGGAA AATGTGGTAC GTGAATATAT CGCAAGTGTT
GTGGAGCATT ATTTAAAGCT TGGGATAGAT GGTTGGAGGC TTGATTGCGG TCAAGACCTT
GGACCTGTCA ATAACGCTTT TATAACCTCA ATTGTGAAAT CTGTTTCCGT TGATAAGTAC
GTTGTTAGTG AGCTTTGGAC TTATCCAGAT AGGTGGGACA TGGTCGATGG GATTATGAAT
TACAATCTCA GAGAGGTTGT GTTTAGTTAT TTAAATGGTG AATTAAAAGA ACCGGGGAAT
GCGCTGGAAG GGGTTTTCAA AAGCACAAGA AATATATACG GATGTTGGAA TATGCTAGAT
AGCCACGATA CTGAAAGACT TGCAAATTCG ATACCAGATA AAGCTTTAAG AAAATTGGCT
ATCGTCTTGC AATTTACGTT CCCAGGTGTG CCAGTTGTTT ATTATGGCAC GGAGATAGGT
TTAGATGGGG GCAAGGATCC GGAGTGTCGA AAAACGATGG TATGGGATAG GAGTAAATGG
GATTTAGATA TGTTTGAGTT TTACAAAAAG TTAATAGCGC TCAGAAAGAG TGAAATCGCG
TTTAAAGTTG GAAGTTTCGA AGTGCTTAAC AATGAGCCTT TGGTGTTTTT AAGGAAGGCA
CCATACGTGC TGGATGATGT AATCGTTGCG GTCAATCCAG GTGAAGAAAG AAAGGTCGCA
GTTTCGGTAA AGGATGGTAG GTTGCTTGAC AGGACGGTCT TTGTTGATTT ATTCACCCAA
GAGCAATTTA AACTCACAAG CGGTGTTCTG AGATTTGAGA TAGCCGAAAA GTCTTTTAGG
ATTTTGAAGC CTTTGAATGA AATCGTTAAA GGGTACAATC AGTACAAAAG AATATATTAA
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| Protein sequence | MLSYPIYPTY PTPYWAFESV VYEIFPDRFA IGKGKSIKDK AHLYKDGILK DWDEPPVSTG
DGKQNKWFYG GDLWGIAEKV GYLKELAINA VYLTPIFKSP SNHKYDAVDY FKVDSQFGGM
NAFKSLLKSL KSNNIRLILD GVFNHVSSQH PWFLKAKRWM RDYVSRFSIY EDGHRGWWGI
RSLPEFHLEE NVVREYIASV VEHYLKLGID GWRLDCGQDL GPVNNAFITS IVKSVSVDKY
VVSELWTYPD RWDMVDGIMN YNLREVVFSY LNGELKEPGN ALEGVFKSTR NIYGCWNMLD
SHDTERLANS IPDKALRKLA IVLQFTFPGV PVVYYGTEIG LDGGKDPECR KTMVWDRSKW
DLDMFEFYKK LIALRKSEIA FKVGSFEVLN NEPLVFLRKA PYVLDDVIVA VNPGEERKVA
VSVKDGRLLD RTVFVDLFTQ EQFKLTSGVL RFEIAEKSFR ILKPLNEIVK GYNQYKRIY
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