| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0573 |
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| Symbol | |
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| ID | 5451938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 633996 |
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| End bp | 635429 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640874318 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001410089 |
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| Protein GI | 154249264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000747167 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATTG CCAAAAATTA TGTTTACAAC TTAATACTAA CAATTAGCAA TATTATTATC
CCTTTTATAA CTATTCCATA CATCACGAGA GTACTTAATC CAGAAGGAAT AGGCGCTGTT
GCATTCACCG GTTCAATAGT TGAATGTTTT GTTATGTTTT CGGCACTTGG AATTACTTTA
TACGGGCCAA GAGAAATAGC ATCCGTCAGA GATAATCCAG AAAAATTAAG AGATACTTTT
TGGAATATAC AATATACGAA AATACTTACA GTACTTGCAT CTTATTTGGC TTTTATCATA
TTCACACTCT TTAGTCAAGA AAAATACAGA GCTTTATATA TAATGCAATC ACTTACCATA
ATAAACACAC TTTTAGATAT CACATTTTTG TTTTCAGGGC TCGAGGAATT TTCAAAAATA
ACAACAAGAG GTCTATTAGT AAGAATAGTA AGCACGATCT TGATTTTTAT TGTTATTCAG
AAACCAGAAG ACTATTATCT TTATCCATTA ATAAATGTTT TATCAAACGT TTTCGGAAGT
ATTATAATGT GGTTTTATTT GCCAAAAAAT TTAAGCATTA CAAAGCCTTC GTTTGAAAAA
ATCAAACAAA CTTTAATTGG TTCATTCAAA TTGTTTGTAC CTCTTGCTGC TATAGAAGTT
TATGTGGTTC TTGATAAAAC AATGGTTGGA ATATTATCAA CAGAAGCAGA AGTTAGCTAT
TATACGATGT CTCAAAGATT AGTAAAAATG ATTTTATCTT TAATTACATC ACTAGGGCCC
GTTATGATGT CAAGAGTATC TAATCTTGTT TCAAATAATC AACACGAGCA GGTGCAAAAA
TATACACGAA TAATTTTTGA TTTTGTTACT TATGCCTCTA TATTAGCAAT TATTCTAACC
ATATTTACAA TGAACGACTT TGTACCTATC TTCTTCGGAA GCAAGTTTTT AAAAGTTAAG
GATTTGATAG TATATATAAC TCCAATAATA TTGTTTATTT CTTGGAGCAA TTTATTTGGA
ATACAAATAA TGGTACCAAT GAAAAAGGAA AATTATTTAA CAATATCAGT GATAGCTGGA
GCAATAACAA ACTTCACGAT GAATTTAATA CTTATCCCAA AATATCAATC ACTTGGGGCT
GTCATTGGAA CGGTTATAGC GGAATTCACA GTTACATTGG TTCAAATTAT TTTGGTAAGG
AAGCTAATCA ATTTAAAACC CCTTTTTAAC GAAATATGGA AACATATGTT ATCTGGTTTA
GTAACATCAC TTGTGTTGAT TTTAATAACT AAGATTAATA TTTCACCAAT TACGAATATT
TTTTTAATAA TTTTAGCTGG AGGAATTGTT TATATTTTAG TCGAATCAAT TTTGAAATCA
TCTACTAACA GTTTTTTACT AAAGAAAATA ATGTCAGCTT TAAAAATAGG ATAA
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| Protein sequence | MSIAKNYVYN LILTISNIII PFITIPYITR VLNPEGIGAV AFTGSIVECF VMFSALGITL
YGPREIASVR DNPEKLRDTF WNIQYTKILT VLASYLAFII FTLFSQEKYR ALYIMQSLTI
INTLLDITFL FSGLEEFSKI TTRGLLVRIV STILIFIVIQ KPEDYYLYPL INVLSNVFGS
IIMWFYLPKN LSITKPSFEK IKQTLIGSFK LFVPLAAIEV YVVLDKTMVG ILSTEAEVSY
YTMSQRLVKM ILSLITSLGP VMMSRVSNLV SNNQHEQVQK YTRIIFDFVT YASILAIILT
IFTMNDFVPI FFGSKFLKVK DLIVYITPII LFISWSNLFG IQIMVPMKKE NYLTISVIAG
AITNFTMNLI LIPKYQSLGA VIGTVIAEFT VTLVQIILVR KLINLKPLFN EIWKHMLSGL
VTSLVLILIT KINISPITNI FLIILAGGIV YILVESILKS STNSFLLKKI MSALKIG
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