Gene Fnod_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0561 
Symbol 
ID5451631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp619461 
End bp620609 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content31% 
IMG OID640874309 
Productglycosyl transferase group 1 
Protein accessionYP_001410080 
Protein GI154249255 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAA GAGTCTTACA CATTATCACT CGTTCAGATT GGACTGGAGT TCAAAAAATT 
TTGTACAACA TAGTTTACGG ACTAAAAAAT AATTATTCCG ACCAATTCGA AGTCGAAGTT 
GCCGCTGGAA AAGAAAATGG AATGTTATTT GAGGAATTGG AAAAGATAGG TGTAAAATAT 
TATGTACTGG AAAACCTTGT TCGAGAAATA AGTCCTATAA AAGATTTGAA AGCTTATTTT 
GAAATAAAAA AGCTCATCAA AAAAGGGAAT TATGACATAG TTCATATCCA TTCATCAAAG 
GCAGGTATAT TAGGAAGAAT AGCGGCAAAA AAATGTGGTG TAAAAAAAGT CATTTACACC 
TATCATGGTT TTTGGGGAAT AGAACAATAT AACGGACTTA AGAAAAAACT TTTAATTCTA 
GCAGAGCGTA TTGCTGCAAA ATATTCAGAC AATCTTGTAT TTCTTGGTAA TAAAGAAAAA 
CAAAAAGCAG AGAAGTATAA AATTGGTAAA CCACACCAGT ATGTCATAAT ACCGAACGCA 
ATATTACCAA TCGAAAACGT TCAAAAAGGA AAACTCAGAA AAGAACTAAA TATACCAGAT 
AATATTAAAA TCATAGGTAA CGTGGCAAGA TTAGATAAGC CAAAAAATCC AATGAGATTT 
CTTGAAATTG CAGAAAAAGT ATTAAAAGAA AGAGAGGATG TTGTTTTTGT ATGGGTAGGA 
GGAAATATTG TCGAAGAAGA TGATTATGCT AATCTAATTA AGAAATATAT AGATGAAAAC 
CCTATATTAA AGGACAAGGT TAAAATTCTA GGCTTTAGAG AAGATGCGAT AGAATTAATG 
GCAGACTTTG ATGTGTTTTT GCTAACTTCG AATGAAGAAG GTTTTGGTCT CGTAATTTTA 
GAAGCGATGT CACTTGGAAA GATTGTAGTT TCAACAAAAT GCGGAGGACC TGAAGATATC 
ATACAAGATA AAATAAACGG GTTCCTTGTA GACTTCGACA ATGATAAAAT TGCGCAAACG 
ATATTTTTTA TATTAGACAA TTTAGAACAA ATATGCAAAA ACATATTTTC GAAAGCTGTT 
GAAAGAGCAA AAGAATTTGA ATATGAAAAG TTTCTAGTGA AACATAAAGA ACTGTATTTG 
ACAAGCTAG
 
Protein sequence
MKKRVLHIIT RSDWTGVQKI LYNIVYGLKN NYSDQFEVEV AAGKENGMLF EELEKIGVKY 
YVLENLVREI SPIKDLKAYF EIKKLIKKGN YDIVHIHSSK AGILGRIAAK KCGVKKVIYT 
YHGFWGIEQY NGLKKKLLIL AERIAAKYSD NLVFLGNKEK QKAEKYKIGK PHQYVIIPNA 
ILPIENVQKG KLRKELNIPD NIKIIGNVAR LDKPKNPMRF LEIAEKVLKE REDVVFVWVG 
GNIVEEDDYA NLIKKYIDEN PILKDKVKIL GFREDAIELM ADFDVFLLTS NEEGFGLVIL 
EAMSLGKIVV STKCGGPEDI IQDKINGFLV DFDNDKIAQT IFFILDNLEQ ICKNIFSKAV 
ERAKEFEYEK FLVKHKELYL TS