| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0550 |
|---|
| Symbol | |
|---|
| ID | 5452913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 607557 |
|---|
| End bp | 608732 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640874299 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001410070 |
|---|
| Protein GI | 154249245 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000102779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAA TAAATATCAA AGATGTAAAA AAGAAAGGGG AAAATGGATT GAGGTTTTTA
GATATTCCAC TTCATCTTTT AGTGATTGGT TTTTCTGTGT TTATATCTTT TATCTATTTT
TTCTTTTCAA AGAGAAGGTA CTTGGATGCT GAGGAAATTA AGAGTGTTGA AAATTCTCAA
GAAAATGGAT TTAGTATTTC CGTTATCATA CCAGCAAGGA ATGAGGAGAG TAATATCGGT
AAGATTTTAA GCCTTTTAAA TTTGCAAACG GTTAAACCTT ATGAGGTCAT AGTTGTGGAT
GATAATTCTA TCGATAGAAC CGCGAAGATT GTAAAGGCAT TCCAGAATGA TAATGAAAGT
ATTAAGTTGA TTAGTTTAAA AGAAGAACCG CCTGAGGGGT GGGTTGGAAA ATCTTGGGCA
ATTTGGAATG GTTACAAGCA TTCGTCAGGT AATATTTTGA TTTTTATGGA TGCGGATGTC
GAGCCCGGTG AGAAGACTTT GGAAGCTTTG GTTAGTAATT ACAGAAGATA CGGCGGTTTA
ATATCCGTTT GGCCGTACCA AAGGTTTGAG AAGTTTTATG AGCATTTGAA TTTGGTTTTT
AACCTTGTCG TTACGTACGC TGGTAATATG TTGGGTTTTC CCTCTGAAAA GCCTGTTGGG
GCATTCGGAC CTGTTATACT AACTTCGAGG AAAGATTACG AAAAGACTGG CGGACATGTA
ACGATAAAGG ATTCAGTGCT GGAGGATATA AAGCTTGGGA AGTTGTATGT TGAGAGTGGT
ATTAGGGTGA CGAATTTGCT TGGTAAAAGT GTTGTCAAAT TTAGGATGTA TCCAAATGGT
TTTAGACAAC TTTTCGATGG GTTTTCGAAA AATATGTCTT CAGGGGCTAT TAGCAATGGA
TTGTTAAATT TTCTCATAGC TCTTATTTGG TTGTCTGGTT TTTATTCGTC TTTTGCTTCT
TTTAATATGC CGTTGGGGTA TGTGGTTTTA AGGTACGCAG GGTTTACAAT TATAGTCTAT
CTTCTTTCCA AACCGATAGG TGATTACAAA TGGTACGATG CGATCATTTA TCCGCTACAT
TTTATTTTCT TTGCTGTTGT TTTTCTTTAT TCTTTGTACA AAACCACAAT CCTTAAGAAA
GTTACATGGC GTGGAAGGGA AATAAAGTTT AAATAA
|
|---|
| Protein sequence | MIIINIKDVK KKGENGLRFL DIPLHLLVIG FSVFISFIYF FFSKRRYLDA EEIKSVENSQ
ENGFSISVII PARNEESNIG KILSLLNLQT VKPYEVIVVD DNSIDRTAKI VKAFQNDNES
IKLISLKEEP PEGWVGKSWA IWNGYKHSSG NILIFMDADV EPGEKTLEAL VSNYRRYGGL
ISVWPYQRFE KFYEHLNLVF NLVVTYAGNM LGFPSEKPVG AFGPVILTSR KDYEKTGGHV
TIKDSVLEDI KLGKLYVESG IRVTNLLGKS VVKFRMYPNG FRQLFDGFSK NMSSGAISNG
LLNFLIALIW LSGFYSSFAS FNMPLGYVVL RYAGFTIIVY LLSKPIGDYK WYDAIIYPLH
FIFFAVVFLY SLYKTTILKK VTWRGREIKF K
|
|---|
| |