| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0543 |
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| Symbol | |
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| ID | 5452032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 599492 |
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| End bp | 601072 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874292 |
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| Product | phytoene dehydrogenase and related protein-like protein |
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| Protein accession | YP_001410063 |
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| Protein GI | 154249238 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000116233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAAAA AAGTTAAAAA AGTTGTAGTT GTAGGTGTGG GAGTAGCCGG TTTAACGGCT
AGTTTGTATT TGCTTTTGGA AGGACACGAT GTCACACTTA TAGAGAAGAA CAATTACTGC
GGTGGGTTGG TGAATTCGTT TAATAGAGCG GATTTTATCT TCGATGGTGG TGTCCCAGCG
TTTTTGAATG CTGGGATAAT TTTGCCTATG CTCAATGAAG TGGGAATTGA TTTAAAGTTT
GTTAAAAACA AAGTTTCCGT TGGTATAGGC GACAAAATTG TGCACGTGAA GGGCGAGGAA
AGTTTTAGGG ATTACGTAGA TATGCTAAAA GAGATTTATC CGGATAGTGT GGAAGATATA
GAGAGATTGG CGTTGGTTAT TTTGAGCGTT ATGAACAGTA TGAAGATTTT GTATAGCGTC
GATAATCCAC TCTTTGTAGA GAAGAAAGAA TTTAAGACTT TTAAGACTTA TCTGCCCTGG
CTTTTGAAAG TTCTAAAGAC CGTGTCGGTT ATGAACAAGC TCAAAGAGCC TGTTGAGGAT
TATGTAGGAA AGATTGTGCG AAACGAATCT CTTAAAGATA TACTTACTCA GCATTTTTTC
AAAAATACAC CCGCGTTTTT CGCATTGAGT TATTTTTACG CATACACGGA TTACATCTAC
CCTGAGAACG GTATCGGTGA ATTGGCATGG AAGATGGAAG AGAAGGTAAG GGAACTTGGT
GGTGAGATTG TATTAAATAC GGGGATTAAA AAGGTAGATG TTGACAAGCA TTTGGTTCTA
GACGGTGATG GAAGGAGTTG GAGATACGAT AAATTAATCT GGGCAGCTGA TTTGAAGCGG
TTGTATAGTA TAGCTTGTTG TGATAGAAAA AGTGAAAAAG TTGAGAAAGA AAAGAATAAA
GTGCTATCTG GGAAGACCAC TGAATCAGTT GTGAAGGTGT TTATTGCTGT TGATGAACCG
GTTGAGTATT TTGAAAAGAT ATCAAACGAG CATTTCTTTT ACACACCAAG CAAAGAAGGG
ATAGGCGAAA TTGAACATTC CGAGCTTGAG AATTTGAAAA GCGCTATTAG AAATGATTTT
AACAATTTCG ATAGAAACGC AATTAGCGAA TGGATTGGTA AGCTTTGTAA ATACACTTCG
TACGAGATAT CTATACCTGC TTTAAGAAAC AAAAATTTAG CTCCGGAAGG TAAGACTGGT
TTGATAGTCA ATTTCTTTTT CGATTACGAA CTTGCGAAGC TGGTCCATGA TGCAGGTTGG
TACGCTGAGT TAAAAAACAT GATTGAAGAG AATGTAATTG AAACATTATC AAATACAGTC
TATCCAGAGC TGAAGGATAA AGTGATTTTT AAATTCTCTT CGACCCCCTT AACGATAGCA
AGGTATGTAG GTACAACAAA TGGTGCGATT GTTGGTTGGG CGTTTGGCAA ACTTGGAGAA
AAACAGCCTA TAAAGAATAG TTTGTCGCAT GCGTATTTGA CTGCGTTTCC GGATATATAC
AAAGCAGGTC AGTGGGCGTA CAGTCCAGCC GGCGTTCCGA TGGCTGTCTT GACTGGTAAA
CTAGCCGCCG GGAAGGTTTG A
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| Protein sequence | MKKKVKKVVV VGVGVAGLTA SLYLLLEGHD VTLIEKNNYC GGLVNSFNRA DFIFDGGVPA
FLNAGIILPM LNEVGIDLKF VKNKVSVGIG DKIVHVKGEE SFRDYVDMLK EIYPDSVEDI
ERLALVILSV MNSMKILYSV DNPLFVEKKE FKTFKTYLPW LLKVLKTVSV MNKLKEPVED
YVGKIVRNES LKDILTQHFF KNTPAFFALS YFYAYTDYIY PENGIGELAW KMEEKVRELG
GEIVLNTGIK KVDVDKHLVL DGDGRSWRYD KLIWAADLKR LYSIACCDRK SEKVEKEKNK
VLSGKTTESV VKVFIAVDEP VEYFEKISNE HFFYTPSKEG IGEIEHSELE NLKSAIRNDF
NNFDRNAISE WIGKLCKYTS YEISIPALRN KNLAPEGKTG LIVNFFFDYE LAKLVHDAGW
YAELKNMIEE NVIETLSNTV YPELKDKVIF KFSSTPLTIA RYVGTTNGAI VGWAFGKLGE
KQPIKNSLSH AYLTAFPDIY KAGQWAYSPA GVPMAVLTGK LAAGKV
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