| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0539 |
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| Symbol | |
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| ID | 5452170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 596524 |
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| End bp | 597378 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640874288 |
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| Product | ABC transporter related |
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| Protein accession | YP_001410059 |
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| Protein GI | 154249234 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000208242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGTTTA ATGAAGAATA TATTTTGCAG GTTGAAAATT TAAGTAAGAG GTTTTCTGAT
AAGCAGGTTT TAAGCGATGT GTCGTTTTCA GTTAAGAAGG GGAGCATATT TGCGCTGATA
GGTCCGAACG GTTCGGGAAA GACAACGACT ATACGGTGTG TACTCGACGC CATTCCAAAA
GATGGTGGAA AGGTTAAGCT ATTTGGCTCA GATTACCTTC CTTCCGTGAA AAAGAAGATA
GCGGTTGTAT CAGAAGACAG GAAGGTTTTC AGATATTTTA CAGCTAACGA TTACGAAGCG
CTTTGGTCGG CTGTTTATCC GAATTGGGAT AAGAGAACGT ACGATACTCT GATTGCAAGG
TATAACTTTA ACTTGAAACA GAGGGTTGAG GATTATTCAA TAGGTATGAA AACGTTATTT
TTCGTTATAC TTGCGATTTC ATCCGGCGCT GAATTGTTGA TATTGGACGA GCCTACCCAA
CACCTTGACC CGACTGTGAG GTTTGAGATA ATGAGGCTTA TAAAGAGTAT AACTTACGAG
GGAAGGACTG CGTTGATCTC GTCGCATGAG ATTTTTGAAT TGGAAGAGTA CGCAACGGAT
TTTGCGATTA TAAAGTCTGG TGTGGTGATT TATTCTGATT CTATCGACGA GGCGAAAGAG
AAACACAGAA TAGTGGGAAA AGGTGAAGAA ATCGCTCCCG GAAGTATAAT AGGGATAGTT
GGCGATGAGG TGCTTATAAG GGTTAATGAA GAGGATAGAG GAAATAAAGA TGTTGGAAGA
TTTCCGAAAT TGAACGATAT AGTTGTTGGG TATTTGAATT CATTGGAAGA TAGGAAAACT
GTACCGATTG TTTAA
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| Protein sequence | MEFNEEYILQ VENLSKRFSD KQVLSDVSFS VKKGSIFALI GPNGSGKTTT IRCVLDAIPK
DGGKVKLFGS DYLPSVKKKI AVVSEDRKVF RYFTANDYEA LWSAVYPNWD KRTYDTLIAR
YNFNLKQRVE DYSIGMKTLF FVILAISSGA ELLILDEPTQ HLDPTVRFEI MRLIKSITYE
GRTALISSHE IFELEEYATD FAIIKSGVVI YSDSIDEAKE KHRIVGKGEE IAPGSIIGIV
GDEVLIRVNE EDRGNKDVGR FPKLNDIVVG YLNSLEDRKT VPIV
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