Gene Fnod_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0534 
Symbol 
ID5451647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp590030 
End bp591013 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content42% 
IMG OID640874283 
ProductBeta-ketoacyl-acyl-carrier-protein synthase I 
Protein accessionYP_001410054 
Protein GI154249229 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.211453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTATG CAAAGATTAT TTCATCGGGT ATGTATGTTC CACAGAAGAT TATGAGCAAC 
TCTGAATTTG AGAAGCTTAC GATGTTTACG ATTGATCCTT ATTTTTCTGA TGTTATTGGT 
ATTAATCATA GGCACGTTTC CGAGGATTGG GAGACACCAA CGTATATGGC AGCCGAGGCT 
GCGAAAAAGG CTTTGCAAAG GGTTGGTATG AGCCCAGAAG AGATTGACTT GATTATCGTT 
GGTACGGATA CTCCAGAATC TGTATCTCCA CCAGACGCAC CAAGGGTACA ATATCTTATC 
GGTGCGCACA AGGCGGAACC TCTTGCGTTT AATGTCAACG CTTCGTGTGC CAATGGCGCT 
CTTATGCTCG ATATAGCAGC TCGATATATA GCTATGGGAG ATTACAAAAA CGTCCTTGTG 
ATTGGTACTT ACGCAATGAC GAAGTTTCTC AGTTGGAAGT ATTCTTGGGA AGCTCTTTTC 
AGTGATGGTG CTGGGGCTCT GCTTTTGACG GCATCGGATG AGCCCGGTTT CATCGGCAGT 
GTGGCACGAG CAGATGGAAG TTGGTGGCAG AATTGGGGTA TATACATGGG CGCTGGAACA 
ATGAACTTGC AAGGTTTTGA AAGGGGATTA CATAAGTTAG ATTTGAGAGC GGCATACCCA 
GCAACAGTTA ACGAAGAAGG ATGGCCAATG CTTATAAATA AACTATTGGA AAAATACGGA 
ATTTTAAAAG ATGAAATTGG AATGATTTTC TTTACGCAAG TTAGGAAGAA GACAATAGAA 
AAAGTTATGG AAATACTAGA ATTACCAAAG GAAAAAGCCC ACATGATTAT GCATAAGTAT 
GGCTATACAG GTTCTGCATG CGTATATATG GCTTACGATG ATGCTTTCGA TGAAGGTAAA 
TTGAAAGATT TGAAAGGTAA GTTTGTTATC TTCTTAACAT CTGGTGTTGG ATTCCAGCAG 
GTTGCTGCTG CGTTTAGAAT GTAA
 
Protein sequence
MRYAKIISSG MYVPQKIMSN SEFEKLTMFT IDPYFSDVIG INHRHVSEDW ETPTYMAAEA 
AKKALQRVGM SPEEIDLIIV GTDTPESVSP PDAPRVQYLI GAHKAEPLAF NVNASCANGA 
LMLDIAARYI AMGDYKNVLV IGTYAMTKFL SWKYSWEALF SDGAGALLLT ASDEPGFIGS 
VARADGSWWQ NWGIYMGAGT MNLQGFERGL HKLDLRAAYP ATVNEEGWPM LINKLLEKYG 
ILKDEIGMIF FTQVRKKTIE KVMEILELPK EKAHMIMHKY GYTGSACVYM AYDDAFDEGK 
LKDLKGKFVI FLTSGVGFQQ VAAAFRM