| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0527 |
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| Symbol | |
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| ID | 5452742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 582133 |
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| End bp | 583821 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874276 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001410047 |
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| Protein GI | 154249222 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.142697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTGGA TAATACTAGC GTTCATACCA TTCATACTTT TAAAGAGTTC GTTCATAATA
ACTATTTTAA GTCTCGTTGG GATTTTCTCA ATTGCCTCCT TAGGGTTGAA TATAATAATG
GGGTACTCAG GGCAGATATC GATAGGTCAC GCGGCGTTTA TGAGCATCGG CGCTTATACT
TCTACACTTT TGGTTATGCA TTACAATGTT CCAATTATAT TTGGTGTTAT CTTAGGTGGT
TTAGTTGCGT TTTTCTTGGG ACTTTTGATC GGATTTCCAG CACTTAGGCT TTCTGGTTTT
TACCTTGCCA TAGCTACTAT GGGGTTTGTC GTTGCTGTTG AGCAACTTTT CAGCACACTT
GAACATGTGA CAGGTGGGCA TGCAGGAATA AGGGGGATTC CGTTCCCACA TATTTGGAAT
TCTGATGTCG AAAAATATCT AATCGTTCTT GCTTTTGTAT TTATAACTTA CGTAATTTCC
GATAGGCTAA TCAATTCCAA AACAGGTCGA GGCTGGATGG CTATAAGGGA GAATGAGATT
GCGGCATCTG TTGTTGGTAT AAATGTTGCA AGGTACAAGG TGTTGGCGTT TGCGATTGGT
TCGATGTTCG CTGGTATAGC AGGTGCTCTT TATGCGCATG TTATCGGGTA TATTGCACCA
AGTGATTTTG GTATCGCCCG TTCTCTTGAT TTACTTGCGA TATCTGTTAT CGGAGGTATG
GCTTCTTTGG ATGGACCATA TTATGGTTCG ATAATATACG TTGCTTTGCC GTTCCTATTC
AGTCGTACGC ATTTGTCTAT GTCGATAATA TTCGGTATAA TTCTAATCTT TGTGGTTTTG
TTTATGCCAT TTGGCGTGAG TTATTATCTG AAAAGGTTCA GAACAGCTTA TTTGAATAGA
GTTTTACCGT TCTTCATGCG TTCTAAGAGA CCGTATGGAA AATTTGTTGA AACATCGCAA
GGAAAGATTC ATTACGTAAA GAGAGGCAAT GGTCAAATCC CAGTAGTTCT TGTACACGGT
AATTTCGCTT CTGCAAGGTT TTTTGAGCCT TTTTTGAGTA AACTTCCAAA AGAATACACC
GCCTATGCGC TTGATTTACC GAATTTTGGT TTTTCCGATA AACTTAAGGG TGATATAACT
ATAGAAAATT ACGCAAAGGC GTTAGAGGCA TTTGTCGATA AATTGGGTTT GAAAGATTTT
ATTTTACTTG GTCATTCGCT TGGTGGAGCT GTCGCGATGG CTTATTCCAT AAAGAATTCG
GATAAGATTA AAAAACTTAT TCTTGTTGAC CCAGCGCCAG TGAATGGTAT GTACATGCCG
GAAGAAGGGT ACAAGGTAGT TAGATTGTAC AGCTACAATC CTGGTATGAT AAAGAAGGCT
TTGATGTTCA ATGCGCCAAA TTACGATGAT GAGAGATTCT TTGATAAAAT AACAGCAGAC
GCGTTGAGAA TGGCAAAAGA AGCTTTCGAA GGCAACGCAA GGGCCTTATC TTCCTATAAC
TTTACCGACG TAGTGAAAAA TGTAAATATT CCAGTTGTAG TTATATACGG TGACAAAGAC
GTTTTACTAA CACGCGAGCA GATGGAATTC ACCGCCAAAG CTTTCCCGAA AGGAACACTT
GTAGTCTTAA AAGATGTTGG ACACAGCCCT GTTGTTGAGG CAATTGATGA AGTATTGAAG
TATTTATGA
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| Protein sequence | MIWIILAFIP FILLKSSFII TILSLVGIFS IASLGLNIIM GYSGQISIGH AAFMSIGAYT
STLLVMHYNV PIIFGVILGG LVAFFLGLLI GFPALRLSGF YLAIATMGFV VAVEQLFSTL
EHVTGGHAGI RGIPFPHIWN SDVEKYLIVL AFVFITYVIS DRLINSKTGR GWMAIRENEI
AASVVGINVA RYKVLAFAIG SMFAGIAGAL YAHVIGYIAP SDFGIARSLD LLAISVIGGM
ASLDGPYYGS IIYVALPFLF SRTHLSMSII FGIILIFVVL FMPFGVSYYL KRFRTAYLNR
VLPFFMRSKR PYGKFVETSQ GKIHYVKRGN GQIPVVLVHG NFASARFFEP FLSKLPKEYT
AYALDLPNFG FSDKLKGDIT IENYAKALEA FVDKLGLKDF ILLGHSLGGA VAMAYSIKNS
DKIKKLILVD PAPVNGMYMP EEGYKVVRLY SYNPGMIKKA LMFNAPNYDD ERFFDKITAD
ALRMAKEAFE GNARALSSYN FTDVVKNVNI PVVVIYGDKD VLLTREQMEF TAKAFPKGTL
VVLKDVGHSP VVEAIDEVLK YL
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