Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0514 |
Symbol | |
ID | 5452119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 561151 |
End bp | 561900 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640874262 |
Product | phospholipase/carboxylesterase |
Protein accession | YP_001410034 |
Protein GI | 154249209 |
COG category | [R] General function prediction only |
COG ID | [COG4099] Predicted peptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.463342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGTTTG TAAATTACCT TGATGTCTTT GAACCACATA TATATGAGGA TGAATTTATA AAGTTGCCAT ACAGGCTCTT TAAACCCAAG ATAAAAGAAG GCGAAGTTTA TCCACTCGTT GTCTTCCTGC ACGGCGCTAG GGAAAGAGGA AATGATAACG AAAAGCAAAT AACAGCAAAC GAAGGGGCAA CTACTTGGGC AAAGGAAGAA TTTCAAAATA ACCACCCTTG CTTTGTATTA GCACCTCAGT GTCCAGAAAA TTCTTATTGG GGAAGTTCTT TTAGAGTTTA CCATGATATG AACCAGCTTG GTCCCAATTC TTTAATTGCA ACTGTTGGAT TGGTTATAGA TGAGCTAGTG GGAAAATTCC CAATAGATAA GGACCGTATA TATGTTACCG GTTTGTCAAT GGGAGGGTTT GGCACCATTG CTCTTTTAAC GTTGTGTCCG GACAAATTCG CAGCAGGTGT TGTTGTATGC GGTGGTGGAA ATCCCAAAAA ATTGGATAAG ATAAAGCACA TACCATTTTG GTTTTTCCAC GCAGAAGACG ATGATGTTGT TTCTGTAGAA TATTCAAGAG CGCTGGTAAA AAAGCTAAAC GAATTAGGTG CAGAAGTTAA TTACACTGAA TATCCAAAAG GCTATATGCA ATCAATCGGT CTATTTCCAC ATGCTTCATG GGTACCTGCG TATAGAGACG AAGAGATGAA GGAATGGCTA TTTTCTAAAA AAAGAAAAGC TCCCTGCTAA
|
Protein sequence | MEFVNYLDVF EPHIYEDEFI KLPYRLFKPK IKEGEVYPLV VFLHGARERG NDNEKQITAN EGATTWAKEE FQNNHPCFVL APQCPENSYW GSSFRVYHDM NQLGPNSLIA TVGLVIDELV GKFPIDKDRI YVTGLSMGGF GTIALLTLCP DKFAAGVVVC GGGNPKKLDK IKHIPFWFFH AEDDDVVSVE YSRALVKKLN ELGAEVNYTE YPKGYMQSIG LFPHASWVPA YRDEEMKEWL FSKKRKAPC
|
| |