| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0508 |
|---|
| Symbol | |
|---|
| ID | 5451557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 554087 |
|---|
| End bp | 556531 |
|---|
| Gene Length | 2445 bp |
|---|
| Protein Length | 814 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640874257 |
|---|
| Product | type I restriction-modification system, M subunit |
|---|
| Protein accession | YP_001410029 |
|---|
| Protein GI | 154249204 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM)
[TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACTGGAG AAAAAATAAC ATTAAGACAG CTAGAAGCAC ATCTTTTTAA AGCTGCTGAT
AAACTCAGAG GTAAAATGGA TGCTTCTGAA TATAAAGAAT ATATCTTTGG TATGTTATTT
TTAAAATACG CTTCGGATGT TTTTGAAGAA AAAAGACGGG AGTTAAAAAA TGAATTCAGA
GATATGGGGT ATTCTGAAGA ACAAATAAAT GAACTATTAG AAGATCCAAA CTCTTACGGC
GATACATTTT TTGTTCCTGA AAGGGCAAGA TGGGAGAATA TTTTGAAATT GAAGGAAGAT
GTTGGTAATC AGCTTAATAA AGCTTTAAGT GCTTTAGAGG AAGCTAATAC AGGGCTCGAA
GGGGTTTTAA AACACATAGA TTTTAACGCG GTGAAAGGAA AAACACGCCT CAAAGATCAG
CAACTTATTG ATCTTATTAA TCATTTCAAT AACTATAAAC TAATACCTTC AAATTTTGAA
TTCCCGGATT TACTTGGCGC TGCTTATGAA TATTTGCTAA AAGAATTTGC TGATTCAGCT
GGAAAAAAAG GCGGAGAGTT TTACACACCA TCTCACGTAA AAAAATTGAT GGTAAGGTTG
GTCAAACCCC GTGAAGGTAT GTCGATTTAT GACCCAACTG TAGGTTCTGG TGGTTTTTTG
ATTGAAGCGT TCCACTATGT TGAAGAACAA GGACAAAACT CAGCAAATTT AGCACTATAT
GGGCAAGAAC TTAATGGATT GACATGGTCT ATTTGTAAAA TGAATATGAT TCTACACGGC
ATTAATGATG CGCAGATAGA AAATGAAGAT GTATTGACAA ATCCCATGTT TTTGGAAAAT
GGATATATAA AAAAGTTTGA CAGAATATTA GCCAACCCAC CTTTCTCAGA AAACTATTCA
CGCGCAAATA TGCAATTTAC AGAAAGATTT AAATATGGTT TTACTCCTGA GAATGGAAAA
AAAGCTGACC TTATGTTCTT GCAACATATG ATTGCCAGTT TGAAAGATAA CGGAGTAATG
GCAACAGTTA TGCCTCATGG TGTTTTGTTT AGGAGCGGAC AGGAAAAAGT TATAAGGGAA
GGAATAGTAA GAGATGACTT GATTGAGGCA ATAATAGGGC TTCCACCTAA ACTTTTCTAC
AACACTGGAA TACCAGCTTG TATTATTGTT ATTAATAAAA ACAAACCAGA AAATTTGAAA
AATAAGATCT TGTTCATTAA CGCCGACAGA GAGTACGGAG AAGGTAGAAA TCAGAATTTC
TTGAGACCAG AAGATATAGA GAAGATAGTT ACAGTGTTTG AAGAAAAGAA GGAAATACCC
AAATATTCCA AATTAGTTGA TATAAAGGAG ATAGAGGAAA ACGACTTTAA TCTAAATATT
AGACGCTATG TTGACAATTC TCCAGATCCT GAAATTGAAG ATGTTCACGC ACACCTTTTT
GGTGGTATTA CAAAACAAGA GGTAATGCTT TACGAAAATC AATTGAAAAA ATTTAGCTTA
AACTATGATA TTTTGCTAAC AGAGAAAAGC GAAAATTATT TGGAGTTTAA AAAGGACGTT
ACTGATAAAA ACCAAATTAG AGAAGTAATT AATAATTCCA CCGAAGTAAA GGGTGTAATA
GAAAAACACA AAGAAAAGCT TTTGGAATGG TGGCAGATTG TAAAACCTGA AATTGAGCAA
TTTTTTGGTA GAAATAATCT TTGGAAATTT AGAAATGAAG CTTTGAAAAA ATTGAAAGAA
TATCTCTTAC CAATCGGAAC GTTTGATGAA TTCAAAATAG CAGGCATATT TGCAAATTGG
TGGGAAGAGC TTGTCTATGA TTTCAAAAGT ATAGTTTCTG CGGGTTGGAA CAAGGATTTG
GTTGAAAGAG AAAGAATTAA AGAAAAATAT TTTAAAGAAG ACATAGAAGA AATTGAAGAT
CTTGAAAGCA GGCTTGCCGA AATTGAAGCG GATTTAAGTG AGCTTTTAGA AGAGGTTGAA
GATTGGGATG AAGAGCAGCA GGGAGATAAA ACTGCAAGCA AAGTCAAAGA GTTTCTGAAG
GACTTGGTTG AAGATTTAAA ATCAAAAGAC AGCGAGGCTG CAAGAAGAGA AGTAAAAAAA
TGGGAAGATT TGTTAGAAAA TATTGTTCAA AAAGAAAAGG AAATTAAAAA GGTAAGAAGT
GAGATAAGCG GAAAGCAAAA GGAACTTGAA AATAAGATAG GTGAAAAGAT TGAATCTATT
ACCGAAGAAG AAGCAAAAGA GCTATTGCTC GAAAAGTTCT TTGAATTAAT TAGCAATCAA
CTTGAAAAGT ACTTAAATGA AGAGAAAAAA GAACTGATAA AGATTTTTGA AAATCTTTGG
GATAAATATA GTGTGTCTCT TGACCGTCTT CTAAATGAAC GAGAACAGGA AGTCAGTAAG
CTAAACAAAT TTTTGGAGGA ACTTGGATAT TACGAGAAAG TTTAA
|
|---|
| Protein sequence | MTGEKITLRQ LEAHLFKAAD KLRGKMDASE YKEYIFGMLF LKYASDVFEE KRRELKNEFR
DMGYSEEQIN ELLEDPNSYG DTFFVPERAR WENILKLKED VGNQLNKALS ALEEANTGLE
GVLKHIDFNA VKGKTRLKDQ QLIDLINHFN NYKLIPSNFE FPDLLGAAYE YLLKEFADSA
GKKGGEFYTP SHVKKLMVRL VKPREGMSIY DPTVGSGGFL IEAFHYVEEQ GQNSANLALY
GQELNGLTWS ICKMNMILHG INDAQIENED VLTNPMFLEN GYIKKFDRIL ANPPFSENYS
RANMQFTERF KYGFTPENGK KADLMFLQHM IASLKDNGVM ATVMPHGVLF RSGQEKVIRE
GIVRDDLIEA IIGLPPKLFY NTGIPACIIV INKNKPENLK NKILFINADR EYGEGRNQNF
LRPEDIEKIV TVFEEKKEIP KYSKLVDIKE IEENDFNLNI RRYVDNSPDP EIEDVHAHLF
GGITKQEVML YENQLKKFSL NYDILLTEKS ENYLEFKKDV TDKNQIREVI NNSTEVKGVI
EKHKEKLLEW WQIVKPEIEQ FFGRNNLWKF RNEALKKLKE YLLPIGTFDE FKIAGIFANW
WEELVYDFKS IVSAGWNKDL VERERIKEKY FKEDIEEIED LESRLAEIEA DLSELLEEVE
DWDEEQQGDK TASKVKEFLK DLVEDLKSKD SEAARREVKK WEDLLENIVQ KEKEIKKVRS
EISGKQKELE NKIGEKIESI TEEEAKELLL EKFFELISNQ LEKYLNEEKK ELIKIFENLW
DKYSVSLDRL LNEREQEVSK LNKFLEELGY YEKV
|
|---|
| |