Gene Fnod_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0503 
Symbol 
ID5451667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp547927 
End bp548601 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content31% 
IMG OID640874252 
Producthypothetical protein 
Protein accessionYP_001410024 
Protein GI154249199 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGA TAAAAATTGA AAAAATAATA CGTTCAAAAA GAAAAACGGT AGCTTTGCAA 
ATAACAGACA ATGGAACATT AATTATTAGA GTTCCATTTA ATTTGAGCGA GGAAAGTATT 
TGGAAAATTA TAAATAAGCA TAAAAATTGG ATTTATAAAA ATAAGCAGGA AATAGATGCA 
AGAGATCCTA AAATCTTGCC AAAAGAATTT GTAAGTGGAG AGGGATTTTT GTATCTCGGT 
AAGTATTATA AATTGCATGT AGTGGAAAAA CAAGATGTCC CACTTAAATT TGAAAATGGT 
TTTTATCTTT CAAAAGATGT TTTGAATGAC GCAAAAAATG TATTCATAGA TTGGTACAAA 
AAGGCTGCAT ATGAAAAGAT TACAGAACGG GTAAACTGGT GGGCTCAAAA AAGAGGATTT 
AAGTATAACA AAATAAACAT AACAAATGCC CAAAAGAGAT GGGCATCCTG CTCTTATAAA 
GGAAATTTGA ATTTTTCTTG GCGACTTATT ATGGCACCAC TTTCTGTTAT AGACTACGTT 
ATTGTGCACG AAATTGTTCA TCTTGAGGAG AAAAATCATA GCAAAGCCTT TTGGGTAAAA 
GTAAAAGCAC TCATGCCTGA CTATAAAAAA TATGAAGATT GGTTGAAAAA GAATGGGTAT 
TTATTAAAGC TCTAA
 
Protein sequence
MEEIKIEKII RSKRKTVALQ ITDNGTLIIR VPFNLSEESI WKIINKHKNW IYKNKQEIDA 
RDPKILPKEF VSGEGFLYLG KYYKLHVVEK QDVPLKFENG FYLSKDVLND AKNVFIDWYK 
KAAYEKITER VNWWAQKRGF KYNKINITNA QKRWASCSYK GNLNFSWRLI MAPLSVIDYV 
IVHEIVHLEE KNHSKAFWVK VKALMPDYKK YEDWLKKNGY LLKL