Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0491 |
Symbol | |
ID | 5452059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 529995 |
End bp | 530975 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874240 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001410012 |
Protein GI | 154249187 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0762118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGTAC TTTTTCTGAC CAAATTAATT GATTATTTTA AATTGAAAAT TGAAGAGTTG AAATCTGAAT TTCCAAACGA TGATTTCGCT ATTCCAGCAG ATAGAATGGA AGCTGAGCAG TTTATTCCGA TAGCTGATGT AATTGTAACT GGTGGATTAA GTGAAAGTCA GTTGAATAAA GCTGAGCGTT TGAAATATAT AATTGTTCCA TGGGCCGGAG TTAATGGCTT ACCTATAGAA GCAATTAAAA AGAGAAATAT TGTTGTTTCA AATAACCATG GGAATGGAAA GATTGTTGCA GAACGCGCTG TTGCACTTGC TTTAGCTGTT ATGGGAAGGG TCGTGGAGTA CCATAACGAT TTGTCAAAGG GTATATGGCA TGGATACGAA GCAGGCTCAA AGAAGGAAGA TTTTTGGTAT TCAATCCAAG GGAAAAAGGT TTCAATTCTT GGGTTGGGAA CCATTGGAAG GAGTATAGCT AAATTGCTTT CTGGATTTGA TTGCGAAATA ATGGGGTACA AAAGGAGTAT CGAATCTGTA GATTATGTTC AACACATTAC CACAGATATC GATGAAGCTA TAAGGTTTGG CGAAGTTATC TTTGTTGCTT TGCCACTTAC GAAATCAACT TATGGAATTA TAGATAAAGA ACGATTGTAT TCAATGCGTG GTAAATTTCT TATAAACGTT GGGAGAGGTC AACTGATTGA TGAAGAAGGA CTTTATTTTG CACTGAAAGA AAATATTTTA GCCGGCGCAG GTATAGATAC GTGGTATCTT TATCCAAATG TTGATCATGC TGTTCAATTA CCTTCTAAAT ATCCAATTCA TACTCTTAGA AATGTTGTCA TTTCTCCACA CGTTGGTGGA TTTACAATAG AAGGGCAGAC TGGCAGGATA GACGAAACGA TAGAAAATCT GAGGTTAATT CTCTCGGGAA AAGCTCCGAA AAATATCGTT GATTTGGATT TAGAATATTG A
|
Protein sequence | MTVLFLTKLI DYFKLKIEEL KSEFPNDDFA IPADRMEAEQ FIPIADVIVT GGLSESQLNK AERLKYIIVP WAGVNGLPIE AIKKRNIVVS NNHGNGKIVA ERAVALALAV MGRVVEYHND LSKGIWHGYE AGSKKEDFWY SIQGKKVSIL GLGTIGRSIA KLLSGFDCEI MGYKRSIESV DYVQHITTDI DEAIRFGEVI FVALPLTKST YGIIDKERLY SMRGKFLINV GRGQLIDEEG LYFALKENIL AGAGIDTWYL YPNVDHAVQL PSKYPIHTLR NVVISPHVGG FTIEGQTGRI DETIENLRLI LSGKAPKNIV DLDLEY
|
| |