| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0454 |
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| Symbol | |
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| ID | 5452569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 492376 |
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| End bp | 493668 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874204 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001409976 |
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| Protein GI | 154249151 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000369122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTTC ATATTTTTAC TTATGGTTGC CAGATGAATG AAAATGATTC GGAAATCGTT
AAACAACTTT TGAAGGATGA AGGTATTGAA CTAACCGATG ACGAAAATGA TGCTGATGTT
GTGATTTTAA ATACGTGCGC CGTTAGAAAG AAATCAGAAG AAAAGGTTTA CAGTCATATA
GGCAAATTAA GAAAAAAAGG TAAAAAAATT GGAATAATGG GTTGCGTTGC TGAAAAAGAA
AAAGAAAACC TCTTTAAAAG AGGTGTTTCT TTTGTTATAG GTACGCGTGC TCTTACAAAA
GTTCCTGATG CAGTTTTGAA TGCTAAAAAT GGAAACAAAC AAATTTATCT TGAAGATACG
TTGGATGAAA TCGAGTATCA TAAAGTCGAA ACACGTTCAT CAAACCACCA TGCTTGGGTA
ACAATTATAC ACGGTTGTGA TAGATTCTGT ACATATTGTA TAGTTCCATA CACACGTGGA
AGAGAAAAAT CTAGACCAAT CGACGAGGTA CTTAAAGAGG TAGAATCTCT TTCACAAAGA
GGATACAAAG AGTTCACGTT CCTTGGTCAA AACGTAGATG CTTACGGAAA AGATTTAAGA
GATGGCACAT CTCTCGCAAA ACTGCTTAAA TTAGCCTCAC AAATTGATAA CGTCAAAAGA
CTTTGGTTTT TGACATCTTA TCCAACGGAC TTTTCACTTG AAATTCCAAA GGTGATGCTC
GAAAGCGAAA AAGTCGCGCG TTCAATTCAC CTTCCGGTAC AACACGGAAG TGATAAAATT
TTGAAAGCTA TGAACAGAAG ATACACACGG CAAGAATACA TTGATTTGAT TAACGAAATT
CGAAAGATAG TACCAGATGC ATCGATATCA AGCGATATAA TTGTTGGTTT TCCTGGTGAA
AATGATGAAG ATTTTGAAGC TACTGTCGAA CTTGTTAAGT TATTGAAATT TGAAAGATTA
AATTTAGCAG TCTATTCTCC ACGTGAAGGT ACTGTCGCGT GGAAATATTT AAAAGATGAT
GTGCCTTATC AGGTTAAAGT CAGAAGGATG TCGTATCTTC TAAACCTTCA GAAAACTATA
AATAAGGAAC TAAATAAAAG CTACCTTGGG AAAGAAGTTG AAGTTATCGT GGAAGCACAA
GCAAAAAATG GCTTGTTCTA TGGAAGAGAT ATCAGAAATA AAATAATTTC GTTTGAAGCT
AACCCGGAAT CGATTGGTAA AAATGTGATT GTAAAAGTGA ATAAAATATC CGCAGGGCCT
TTGTACGGTG AAATTAAAAA AATCTTAGAC TAA
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| Protein sequence | MKVHIFTYGC QMNENDSEIV KQLLKDEGIE LTDDENDADV VILNTCAVRK KSEEKVYSHI
GKLRKKGKKI GIMGCVAEKE KENLFKRGVS FVIGTRALTK VPDAVLNAKN GNKQIYLEDT
LDEIEYHKVE TRSSNHHAWV TIIHGCDRFC TYCIVPYTRG REKSRPIDEV LKEVESLSQR
GYKEFTFLGQ NVDAYGKDLR DGTSLAKLLK LASQIDNVKR LWFLTSYPTD FSLEIPKVML
ESEKVARSIH LPVQHGSDKI LKAMNRRYTR QEYIDLINEI RKIVPDASIS SDIIVGFPGE
NDEDFEATVE LVKLLKFERL NLAVYSPREG TVAWKYLKDD VPYQVKVRRM SYLLNLQKTI
NKELNKSYLG KEVEVIVEAQ AKNGLFYGRD IRNKIISFEA NPESIGKNVI VKVNKISAGP
LYGEIKKILD
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