Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0447 |
Symbol | |
ID | 5451522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 484900 |
End bp | 485805 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640874197 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001409969 |
Protein GI | 154249144 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACTTT TTGTAGGTGA ATTACTTGCC GATATGATTA CAGAAGAAAT TTTTGATGCT GCCGAGCATT TTGAGCTGAA AATAGGCGGT TCACCCGGTA ATATAGCACG GTACCTTGCT CAGTTGGGTA TTCCTACACG GATTCTTTCC AAAGTTGGGA ATGACATTAT TGGTGAACGA ATTATAGATA AACTAAGTCA AAATGGTGTG GATACGAAAT ATATCCAAAT AGATAATTTC TTTGGAACCA CACTTGTCTT TGTCCAAAAA ACTCCTGGAA GCCCTGATTT TTTTGTTTTA AGAGGAGCAG ATAGATTTTT AGAATTGCCA AGTGAGGATA TTTTTCAAGG TATAAAAATT TTACATTTGA GTTGCTGGCC TATCTCTTTC AGTGAGACTT TTGAAAAAAC GATTTCGATT GTGGAAAAGG CAATTAATAG TGGTATTTCA ATAAGCTTTG ACCCAAACTG TAGAGACAAA ATATTCGAGT GTGGCAAAAT AACAAAAGAT AGGATAAATT ATATATTGAA ACACACTACA TATTCTAAAC CTTCTTTAGA CGATGCGATA GCTATGTTTG GCGATGTTGA TTATCCATTA GAAGATGCCG TGCGTTACTA CATAGGTGAA TTTCATAAAG CTGGAGTTAA AAATGTTGTT TTAACTGCTG GTAAGTATGG TGCATATGTT TCAGATGGAG CTGAAATAGT CCATATTCCA AGTTATGCAA AAATTGTTGT TGACGCAACG GGTGCTGGTG ATGGCTTTTG GGCTGGAATG TATTATGGAA TATTAAATGG AAAAGATTTT GTTCAATCTT GTATAATAGG GAGTAAAGTT GCGTCTTACA TACTTGGTTT TGTTGGAGCT GATGTTGAAT TGAACAGAGA TATTTTGGAG GACTGA
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Protein sequence | MVLFVGELLA DMITEEIFDA AEHFELKIGG SPGNIARYLA QLGIPTRILS KVGNDIIGER IIDKLSQNGV DTKYIQIDNF FGTTLVFVQK TPGSPDFFVL RGADRFLELP SEDIFQGIKI LHLSCWPISF SETFEKTISI VEKAINSGIS ISFDPNCRDK IFECGKITKD RINYILKHTT YSKPSLDDAI AMFGDVDYPL EDAVRYYIGE FHKAGVKNVV LTAGKYGAYV SDGAEIVHIP SYAKIVVDAT GAGDGFWAGM YYGILNGKDF VQSCIIGSKV ASYILGFVGA DVELNRDILE D
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