| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0444 |
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| Symbol | |
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| ID | 5451966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 480432 |
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| End bp | 481703 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874194 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001409966 |
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| Protein GI | 154249141 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGTGA AGTTATCAGA TTTATTTGGT CATAAATTTG TTATAGATTC ACGAAAAGTC
CAACCAGGTG ATGTATTTGT TGCTATTAAA GGAAACAATG TTGATGGGCA CGACTTTGTA
AAACACGCTT TTGAAAACGG TGCATATGCA GCTATTGTTG AGAAAGATAC GGGATTTGAA
AATCAAATAA TCGTTCCTAA CACCGTTGAA TTTCTTGGTC AATTAGCTAA GACTATCGTT
GAAAAGTTCA AGCCTAAGAT TATAGGAATT ACAGGCTCAA ATGGCAAAAC TTCCACGAAA
GAGATTGTAT GGTCGGTCTT AAGTTCTGAA ATATCTGCTT TCAAAAATGA AGGAAATTTA
AATTCTGAAA TAGGTCTCCC ACTGTCTATT ATAAATTCTT ATAGGGGTGA ATCTGTTTTA
ATTCTCGAAA TGGCTCAAAG GGTAGTTGGA GATATTGAAT ACTTGTGCAA AATTTTTCCG
CCAGATATTG GGGTCTTGCT TAATGTGGGG AGTGCTCATG TTGGAGTTGC AGGAAGTGTT
GAAAACATTT TCAAGGGTAA GTGGCAAATT GTGGAAAATT CAAAAGAAGC ATTGGTAAAT
TTTGACGATG AAAGAATGAG ATGTACAAAA TGTAGGTATT TCGGCACTAC CGGCGGAGAT
TATATACTTT CTAAAAGAGA ATACAACGGT TCATCAACTA TTCTTACCTT TGAATATGAA
GGCGAAGAAT TTTATTACCA GCTTCCTGGA TATTGGACAA AGCCGATGGC CTTATCTGCT
TTAGTAGCCT TTGGTATTGC GGATATGATT GATGTATTAT TTAATCCGCT CAACCTGGCG
AATTACAAAC CTTTAAAAGG GAGATTTAAT GTTCACAGAT TTAGCAAAGG ATATTTAATT
GATGATACTT ATAACGCGAG CTATGAGTCG TTTAAAGCGG GCATAGAAGA AATTTTAGAA
AATTTTCCTA AACCGCGTTA TGCGATAGTT GGTGCTATGA AAGAATTAGG CGAATATTCA
ACTTATTATC ATAAAAAGCT TTCTGAACTT TTAGAACAAC TTGATGGTGT TGTTGTTTAT
GATAAAGAGG AAGAATCAAA GGACATAAGC TGTTCGAATA TAATATTCAG AAGCGCAGAT
GATAAAGAAA TTATAAGCTT TTTAAACAAT AGGTTAATCA ACGATAGTTT CGATGGTGTA
CTTTATTTCA AAGCATCACG TGCTGTTGAA CTTGATAAAA TAGTCGAAGA AGTGTTAAAT
CGAAAATTTT AG
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| Protein sequence | MPVKLSDLFG HKFVIDSRKV QPGDVFVAIK GNNVDGHDFV KHAFENGAYA AIVEKDTGFE
NQIIVPNTVE FLGQLAKTIV EKFKPKIIGI TGSNGKTSTK EIVWSVLSSE ISAFKNEGNL
NSEIGLPLSI INSYRGESVL ILEMAQRVVG DIEYLCKIFP PDIGVLLNVG SAHVGVAGSV
ENIFKGKWQI VENSKEALVN FDDERMRCTK CRYFGTTGGD YILSKREYNG SSTILTFEYE
GEEFYYQLPG YWTKPMALSA LVAFGIADMI DVLFNPLNLA NYKPLKGRFN VHRFSKGYLI
DDTYNASYES FKAGIEEILE NFPKPRYAIV GAMKELGEYS TYYHKKLSEL LEQLDGVVVY
DKEEESKDIS CSNIIFRSAD DKEIISFLNN RLINDSFDGV LYFKASRAVE LDKIVEEVLN
RKF
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