| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0438 |
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| Symbol | rplU |
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| ID | 5451999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 476394 |
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| End bp | 476714 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640874188 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001409960 |
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| Protein GI | 154249135 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000719851 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTACGCTA TCGTAGAAAA CGGTGGAAAA CAGTACAAGG TGGAAGTTGG ACATTTACTA
CACACGGAGA AGATGAACGG TGTTGCGCAG GGTGACAAAG TTGTTCTTGA CAAGGTGGTT
CTTGTGAAGA CAGATGACGG TAAGGTTCTT GTTGGTAAAC CATACTTGAC GAACGTAACT
ATCACTGGAA TTGTTGTTGA GCACGCAAGA GCCAGAAAAA TCCTCGTTGG TCAGTTCATC
CCAAGAAAAG GACACAAGAC TATAAAAGGA CATAGGCAGT GGTACACAAC TATAAAGATT
GAGAACATTG AAATTAAGTA A
|
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| Protein sequence | MYAIVENGGK QYKVEVGHLL HTEKMNGVAQ GDKVVLDKVV LVKTDDGKVL VGKPYLTNVT
ITGIVVEHAR ARKILVGQFI PRKGHKTIKG HRQWYTTIKI ENIEIK
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