| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0432 |
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| Symbol | |
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| ID | 5452425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 472409 |
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| End bp | 474091 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640874182 |
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| Product | DNA primase |
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| Protein accession | YP_001409954 |
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| Protein GI | 154249129 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.728386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCAA AGGACATTAT TGAGAAAATT AAAGAGAAGA ATGATATTGT GGAAGTCATA
TCTGAATACG TAAATCTTCA AAAAGTAGGC TCTAACTACA GAGGCCTATG TCCTTTTCAT
TTGGAAACTT CTCCATCTTT TTACGTAAGT CCCACCAAAA ATATATATCA TTGCTTTGGT
TGTGGTGCTT CTGGAGATGT TATAAAGTTT GTTCAGCAAA TTGAAAATAT ATCTTATACT
GAAGCAATTA AGAAACTAGG AGAACGTGTT GGAATTACAG TAAACTTCAC AGAAGAAGAT
GAGACAAGGA GTCTTTACTA CTCTTTTTAT AAACAATTAC ATCAAGAATA TATTGCCGTA
CTTGGAAAGT CGCCAAATAT CGTTGATTAT CTAAAAAAAA GGGGATTTAA CGAGAGGGAA
ATTTCACTTT ACGAATTTGG TTTTTCACCT TCAAACTCGC AGCTACCACA GAAAGTTGCC
CAAAGATTGC AAATTTCAAA GGAAATGCTT GAAAAGTTTG GTTTCGGACA TAGCGATCCT
TTCTCAGGTC GTGTGATTAT ACCTATAAAA GATGATTATG GAAGAGTTAT AGCTTTTGGT
GGAAGAGTAG TTGGCGATGG AGTGCCTAAA TACTTAAATT CGCAGGATAC TTTGATGTTT
AAGAAAACAT CAACTTTATT TATGCTTGAT AGTGCAAAAG AATACATAAA AGAAATAGAT
TACGTTATAA TTTGCGAAGG TTACTTCGAT GTCCTTGCAT TTCATAGGGC TGGAATTAAA
AACGCAGTCG CTACACTTGG AACTGCGCTT ACGAAGTCAC ATATTTACAA ATTGAAGAAA
TACACAAATA ACGTTATTCT TGCATTCGAT AGTGACAGCG CTGGTATAAA AGCGACGCTG
AGGAACATAG AAACTTTGCT TTCAGAAAAG TTCAATGTTG TTGTTGCCAA TTTTTCAAAA
GGAAAAGATG CAGATGAGGT ATATTTTAAA TTCGGCAGCA ATGGATTACT TGAAGCGTTA
GATAACTCTG AAAGCTCTGA AATTTTTGTT GTTAACGTGT TATCACGTGA ATACGATTTA
TCAAATCCAA ATGGTGTCAA CACATTTTTA AGGAACCTTG CAAAATGGAA AAATGTTTTT
GAATTCAATC CAACGGCACT TGATAACTTT TACAAACGGA TAGCCTCTTT GCTTAACTCT
GAAAAAGAAG TTATTAAATC AAGATTTTCA ACTATAACAG CTGATAGTGG CAAAAGTACA
ATCTATAATG CACAAATAGA GGAAAGAAAA GTAAAAATTC CAAAGACTGA AGATTACCTT
GTATATATTT ATTTCAACTA TCCTGATTTG TTTAAAACAT TGGATTTTTC ACCAGATATT
CTTGAAGGAA AAGCCAGAGA ATTTTTCTTA ATTGCAAAAG ATTTGAACGT TTCTCTTGAA
CAGTTGTCTA AAGATATGGG AAGTTTTGTT AAAGAATGCT TAGAGAAGAT AGATATCGAG
GTGGATGAAA AAGTTCTTGA AAATATAAAG AAAGACCTTC AAATTAGAAA GATTGAAAAA
AGAATTGCAG AAATAGATGA GCTAATAAAA AAATCGGTAA GCACCGACGA AAGAAATATA
CTACTAAATG CTCGGATGGA ATTAGTAAAA CAAAAAAACA TGATTAATAA GTCCTCAAAA
TAA
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| Protein sequence | MIPKDIIEKI KEKNDIVEVI SEYVNLQKVG SNYRGLCPFH LETSPSFYVS PTKNIYHCFG
CGASGDVIKF VQQIENISYT EAIKKLGERV GITVNFTEED ETRSLYYSFY KQLHQEYIAV
LGKSPNIVDY LKKRGFNERE ISLYEFGFSP SNSQLPQKVA QRLQISKEML EKFGFGHSDP
FSGRVIIPIK DDYGRVIAFG GRVVGDGVPK YLNSQDTLMF KKTSTLFMLD SAKEYIKEID
YVIICEGYFD VLAFHRAGIK NAVATLGTAL TKSHIYKLKK YTNNVILAFD SDSAGIKATL
RNIETLLSEK FNVVVANFSK GKDADEVYFK FGSNGLLEAL DNSESSEIFV VNVLSREYDL
SNPNGVNTFL RNLAKWKNVF EFNPTALDNF YKRIASLLNS EKEVIKSRFS TITADSGKST
IYNAQIEERK VKIPKTEDYL VYIYFNYPDL FKTLDFSPDI LEGKAREFFL IAKDLNVSLE
QLSKDMGSFV KECLEKIDIE VDEKVLENIK KDLQIRKIEK RIAEIDELIK KSVSTDERNI
LLNARMELVK QKNMINKSSK
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