| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0425 |
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| Symbol | |
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| ID | 5453016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 464905 |
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| End bp | 466086 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874175 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001409947 |
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| Protein GI | 154249122 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCAAGTA CTTTATTGGA AAAAGAATTA ATTGAGGCTA TAGCAAAAAC TTATGGTACA
CCAGTTTATG TTTATTCACG TGAAGAGATT TTGAAAAGAA TAAGTACCGT TAAGGATGTT
TTCAGCAGCG TAAATCTTTT CCCAACATTT GCATGCAAAG CAAATAATAA TCCAAGGATT
ATAGAAATGT TTAAAGACAA TGGTTTTGGT GCAGATATAG TATCCATCGG TGAGTATCAT
GCTTGTAAGT TAGCAGATGT AGATGACAAA AAAATTGTTT GGAATGGAAA TGGTAAAACT
AGAAAAGAAA TAGAAATACT TTCAAAAAAA GTAGGGTATG TAAATATAGA TTCTGAAGAA
GAATACGAAA TTTGGTCAGA AATAGATAGC AGTGCGGAGT TTTTTCTGCG TGTAAATCCT
GACGTCGATG CAAAGACACA TCCGCATATA TCGACAGGTT TGAAAAAAAG CAAATTTGGT
ATACAAACTG ATGAAATTGA TAGAATACTA TCAAAGAAGA GACTGAACAT TTCTGGATTC
CATGTTCATA TAGGTTCTCA GATAACTGAT GTTGAACCTT TTGAAGAAGC TATTTCCAAA
GTTGTTGATT TGTCTAAAAA ATACGGATTT TCAAAAATTA ACATAGGTGG TGGTTGGGGA
ATAAAATACA AAGATAAGGA ATTGGACATT TTAGAGTATA AAGAGAGAAT TGTGCCTTAT
TTAAAAGATT TCAAAATGGT GATTCTCGAG CTTGGGAGAT ATATGATTGC TCCAGCCGGG
TTACTTGTTT TAAAAGTGGA ATATGTGAAA AAAACTCGGC ACAAAACCTT TGTAGTTTTA
GACGGAGGAA TGAATGTACT TATGAGACCT GCAATGTACA ATGCTTATCA TGAAGTAAAT
GTATTAGATC CAGAAAGCAG TGAAAAATAT ATCATTGATG TAGTCGGTCC ACTTTGTGAA
TCAGGAGATA TTATCGCTTT CGAAAGGAAT TTGGAAATAC CGAAAGTTGG AAGTTACGTA
ATTGTTCGAG ACGTAGGTGC TTATGGTTAT TCCATGTCAA ACAATTACAA CTCTATGCCA
AGACCTGCAG AAGTGATTGT GTACGAGGAA AACGGAAAAT ACGACTTCAG ATTAATAAGA
AGAAGAGAAG AAATTGAAGA AATGTTTAAA ACAATAGTTT GA
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| Protein sequence | MPSTLLEKEL IEAIAKTYGT PVYVYSREEI LKRISTVKDV FSSVNLFPTF ACKANNNPRI
IEMFKDNGFG ADIVSIGEYH ACKLADVDDK KIVWNGNGKT RKEIEILSKK VGYVNIDSEE
EYEIWSEIDS SAEFFLRVNP DVDAKTHPHI STGLKKSKFG IQTDEIDRIL SKKRLNISGF
HVHIGSQITD VEPFEEAISK VVDLSKKYGF SKINIGGGWG IKYKDKELDI LEYKERIVPY
LKDFKMVILE LGRYMIAPAG LLVLKVEYVK KTRHKTFVVL DGGMNVLMRP AMYNAYHEVN
VLDPESSEKY IIDVVGPLCE SGDIIAFERN LEIPKVGSYV IVRDVGAYGY SMSNNYNSMP
RPAEVIVYEE NGKYDFRLIR RREEIEEMFK TIV
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