Gene Fnod_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0423 
Symbol 
ID5452213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp463257 
End bp463892 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content35% 
IMG OID640874172 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001409945 
Protein GI154249120 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC CAAAACCAAC TATAAAAAGA TTAGGGCTTT ACTATAGGTG CCTTAACAGA 
TTTAAAGATG ATGGTGTTAA CTTTGTGTCT TCGCAAGATA TTGCTGAAAG ATTGAATATT 
AAACCTAGCC AAGTTAGAAA AGATTTATCT TACTTTGGGG AGTTTGGCAA AAGAGGATTG 
GGATACAACG TCAAAAAGCT TCTTGGAGAG ATAGCTGATA TCATTGGTAT AAATAAAGAA 
TGGAATGTAG CTATTATAGG TGCTGGTAAT CTCGGGACCG CATTGGCAAA TTACCCTGGT 
TTGCCAAAGC ACAAATTCAA AGTCGTAGCT ATATTTGACA ACGATAGAGA AAAAGTCGGT 
AAGAAAATCG CGGGAATTAC CGTATATCAT ATGAGTGATT TGAAAGAATT AGTCGAAAAA 
ATGAACATTG AAATGGCAGT TATCGCAGTT CCAGAAAGTG CCGCTCAATT AGTTGTGGAG 
CAAATCGAAG AAACCAGTAT AAAAGGAATA GTTAACTTCT CACCTGTAAA ATTGAGAACA 
TCTTTACCTG TTGAAGATGT TGATATAACT CTTTCATTTG AAACTTTGTC GTATATGATA 
ATCAACAGAA TGCTTGGAAA TGAAATAAAT GAGTAA
 
Protein sequence
MKIPKPTIKR LGLYYRCLNR FKDDGVNFVS SQDIAERLNI KPSQVRKDLS YFGEFGKRGL 
GYNVKKLLGE IADIIGINKE WNVAIIGAGN LGTALANYPG LPKHKFKVVA IFDNDREKVG 
KKIAGITVYH MSDLKELVEK MNIEMAVIAV PESAAQLVVE QIEETSIKGI VNFSPVKLRT 
SLPVEDVDIT LSFETLSYMI INRMLGNEIN E