Gene Fnod_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0418 
Symbol 
ID5452853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp455077 
End bp456093 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content35% 
IMG OID640874167 
Productalanine racemase 
Protein accessionYP_001409940 
Protein GI154249115 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.923997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAT TTGTAACTAT TCGTGATATA GCACGTGAAG CCGGGGTGTC AATAAATACA 
GTTTCACGAG CTTTAAATGA TAAGCCAGAT ATAAATGTTG AAACTAAAAA GAAGGTACTG
GAAGTTGCGG ATCGTTTAGG TTATATAAGG GACGCAACCG CCGTTTCGCT GCGTTACGGT
TTGACACGCG TTATCGGCGT TATATTAGAA GATAGCTCAA ATCCATTTTA TTCCGAAGTC
TTAAAAGGTA TAGAAATGGC CGCCAAGAAG AAAAAATTTA ACGTGATTTT CATGAACACA
GAAAGAAGTT ATGAATTAGA AAACGAAGCT ATAAAAACTA TGATTGGCAG GAGAGTAGAT
GGGATGATAA TTTCGCCTAC ACAAGAAAAG TGCGACGATA TAAAGCTTCT ATCAGAAAAA
GGGATACCTT TTGTCGTGCT TGGTGTTCAC TTCGATGAGC TAAACGTCCC GGAAATATAC
ACAGACGATG AAAAAGGTGG TTATCTCGCA ACTAAGCATC TTATTGAAAT TGGAAGAAGG
AGAATATTGT TTTTGAATGG GTTTACTTAT AAATCTGTCG CAAAAATGAG GTTAAATGGT
TATAGAAAGG CACTTAAAGA ATTTGGATTG GAATATGATA AATCTCTTGT CCATGAGATT
GAAGAAGGAT ATGAGAATGC ATACAACAAG GTAAAAGAAC TATTGAAAAA AGGTATAAAA
TTTGACAGTA TTTTCTGTTT TAATGATGTC TTTGCGATAG GTGCAATTGG TGCTCTGAAG
GAGGAAGGGA TAAAGGTTCC ACAAGATATT GCTGTTGTTG GGTACGATGA CATATATTTT
TCTAAGTTTA TCTCCCCCTC ACTTACAACA GTTAAAATAG ACAAAATTTT GGAAGGCAAA
TTAGCATTTG AAATGCTACA CGGGATACTT ACTAAGAAGA CAGGAAAAAA TGTTAAAAAT
GTATTAGATG TGGAATTGAT TGTTAGGGAA TCAACAATTG ATAAAATAGG GGAGTGA
 
Protein sequence
MKKFVTIRDI AREAGVSINT VSRALNDKPD INVETKKKVL EVADRLGYIR DATAVSLRYG 
LTRVIGVILE DSSNPFYSEV LKGIEMAAKK KKFNVIFMNT ERSYELENEA IKTMIGRRVD
GMIISPTQEK CDDIKLLSEK GIPFVVLGVH FDELNVPEIY TDDEKGGYLA TKHLIEIGRR
RILFLNGFTY KSVAKMRLNG YRKALKEFGL EYDKSLVHEI EEGYENAYNK VKELLKKGIK
FDSIFCFNDV FAIGAIGALK EEGIKVPQDI AVVGYDDIYF SKFISPSLTT VKIDKILEGK
LAFEMLHGIL TKKTGKNVKN VLDVELIVRE STIDKIGE