Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0418 |
Symbol | |
ID | 5452853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 455077 |
End bp | 456093 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640874167 |
Product | alanine racemase |
Protein accession | YP_001409940 |
Protein GI | 154249115 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.923997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAT TTGTAACTAT TCGTGATATA GCACGTGAAG CCGGGGTGTC AATAAATACA GTTTCACGAG CTTTAAATGA TAAGCCAGAT ATAAATGTTG AAACTAAAAA GAAGGTACTG GAAGTTGCGG ATCGTTTAGG TTATATAAGG GACGCAACCG CCGTTTCGCT GCGTTACGGT TTGACACGCG TTATCGGCGT TATATTAGAA GATAGCTCAA ATCCATTTTA TTCCGAAGTC TTAAAAGGTA TAGAAATGGC CGCCAAGAAG AAAAAATTTA ACGTGATTTT CATGAACACA GAAAGAAGTT ATGAATTAGA AAACGAAGCT ATAAAAACTA TGATTGGCAG GAGAGTAGAT GGGATGATAA TTTCGCCTAC ACAAGAAAAG TGCGACGATA TAAAGCTTCT ATCAGAAAAA GGGATACCTT TTGTCGTGCT TGGTGTTCAC TTCGATGAGC TAAACGTCCC GGAAATATAC ACAGACGATG AAAAAGGTGG TTATCTCGCA ACTAAGCATC TTATTGAAAT TGGAAGAAGG AGAATATTGT TTTTGAATGG GTTTACTTAT AAATCTGTCG CAAAAATGAG GTTAAATGGT TATAGAAAGG CACTTAAAGA ATTTGGATTG GAATATGATA AATCTCTTGT CCATGAGATT GAAGAAGGAT ATGAGAATGC ATACAACAAG GTAAAAGAAC TATTGAAAAA AGGTATAAAA TTTGACAGTA TTTTCTGTTT TAATGATGTC TTTGCGATAG GTGCAATTGG TGCTCTGAAG GAGGAAGGGA TAAAGGTTCC ACAAGATATT GCTGTTGTTG GGTACGATGA CATATATTTT TCTAAGTTTA TCTCCCCCTC ACTTACAACA GTTAAAATAG ACAAAATTTT GGAAGGCAAA TTAGCATTTG AAATGCTACA CGGGATACTT ACTAAGAAGA CAGGAAAAAA TGTTAAAAAT GTATTAGATG TGGAATTGAT TGTTAGGGAA TCAACAATTG ATAAAATAGG GGAGTGA
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Protein sequence | MKKFVTIRDI AREAGVSINT VSRALNDKPD INVETKKKVL EVADRLGYIR DATAVSLRYG LTRVIGVILE DSSNPFYSEV LKGIEMAAKK KKFNVIFMNT ERSYELENEA IKTMIGRRVD GMIISPTQEK CDDIKLLSEK GIPFVVLGVH FDELNVPEIY TDDEKGGYLA TKHLIEIGRR RILFLNGFTY KSVAKMRLNG YRKALKEFGL EYDKSLVHEI EEGYENAYNK VKELLKKGIK FDSIFCFNDV FAIGAIGALK EEGIKVPQDI AVVGYDDIYF SKFISPSLTT VKIDKILEGK LAFEMLHGIL TKKTGKNVKN VLDVELIVRE STIDKIGE
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