Gene Fnod_0406 details

Gene Information

• Locus tag: Fnod_0406
• Symbol: engB
• ID: 5452771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 442365
• End bp: 442970
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640874155
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_001409928
• Protein GI: 154249103
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAA TTCCAAAGAA AGTAGAAAAG GTAGAACTCG TAAAGGTAAT AGCAACACTA 
AATGATAAAT TTCCTCATCC TCTTAACGGT GAATATGCCT TTGTTGGAAG GTCAAATGTC 
GGAAAATCGA GTTTGCTTAA CGCACTTGTA GGTAAAAAAG TAGCGTTTGT AAGTAAAAAT 
CCGGGTAAGA CAAGCACAAT AAATTACTTT TTGATTGATA ACAGATTTTA TTTTGTAGAT 
TTACCTGGCT ACGGTTATGC AAAAACATCG AAAAAAGACA GAGAACTTTG GAGAAAAGTT 
ATAGAGAGAT ATTTTTCCGA ACGTTCTTGG AATATGAAAG TAATGTTTTC GCTTATAGAC 
TCGCGACATG AGCTGATGGA ATCAGATGAA CAGTTACTTG AATGGACTCA GATACTTGGA 
GTTAAGCCTG TTGTTTTGCT TACAAAAATA GATAAATTGA ATAGTTCTGA GAGATTAAAA 
CAAATCAAGT ACTTTGAAAA TATATTAAAA AGTTATGGTA TAGAGAGAAT CATTCCATGT 
TCCTCGTTGA CTAAGGAAGG GCTAGATGAA GTGTGGAATG TTATATTTGA AACGCAAAAT 
TATTAA 

 

Protein sequence

MKIIPKKVEK VELVKVIATL NDKFPHPLNG EYAFVGRSNV GKSSLLNALV GKKVAFVSKN 
PGKTSTINYF LIDNRFYFVD LPGYGYAKTS KKDRELWRKV IERYFSERSW NMKVMFSLID 
SRHELMESDE QLLEWTQILG VKPVVLLTKI DKLNSSERLK QIKYFENILK SYGIERIIPC 
SSLTKEGLDE VWNVIFETQN Y