Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0404 |
Symbol | |
ID | 5452880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 439216 |
End bp | 440616 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640874153 |
Product | histidine kinase |
Protein accession | YP_001409926 |
Protein GI | 154249101 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATTC AACAACTTCT TTCCAAGTAT ATGTTGGAAA TATCCAAAGT AAGAGACGAA AAATCGTTGT ATACTGCAGT ATCAGAAATC TTAAAAAAAA TCGTCAGTTT TAGTGTTCTC AATGTTTTTA ATCAAAATAA TCTTGTTTTT TCAGAACCAG AAGGTCAACA TATTGAAAAA GAAATTTTTT CAGATTATCT GCCATGGATT GAGCAAAGAC TCTATCCTAC ATTTTTACCA TTAGAAAATG GATACATTGG ATTAATTCCT GTATTCAAAG CAAACAAACT ACTTTCGACA ATAGTGATTG AAACAACCGA AGAGCCAACT GCAGAAGTTG TTGATTATAT TCAACTTCTT TCTTACCTTT CAGGAATTAC ACTTGAGAAC CTTAGACTCA TAGATTTCGT TGACAAGGCA AGGGAGTACT TTGAGAGCAT CATTAACCTT TCAAACGATG GTATTGTTGT TTTAAATGAA CTTAAAGAGA TTGAGTTTAC AAATAGTAAA GCTAAAGATA ATTTAAAAGA TAATACCGAA CTTTTACGGG AAATAATTGA TCGTATAGAA AATAATGAGG AATTTTTCGA AGTCGAAACT CACAAATCAT TTTTCAGTAT TTCTGTGAAA CAAGTAAATC TTCTTGGAGA AAAAAAGGTA CTTGTTAACA TAAGAAACAT AACTTCGGAA AAAGAAGTCC AAAAATTAAA AGAATTAGAC AAAATAAAGA CTAATTTTAT TGCCAATATC TCCCACGAAT TGAGAACCCC GCTTGCAGCA ATAAAAGCAT ATGTTGAAAC GATGTTGAAT ATGCCTATGA GCCAAGAAGA AATACATGAA TTCCTCGATG TGGTTTACAG CCAATCAATC CGTTTAGAAG AATTGCTTAG TGACTTACTT GATTTTTCTC AACTTGAATC TCATACGATG AAAATTTTAA AAGAAAGCGT CAATATATGT GAAATAATTG AACACTCAAT AGAAACTTTA GAAAATATGG CAAAGGAAAA AGATGTAACA GTCGAGTATA ACTGCTCTAA CTTAGAGATT AAATGTGATA GAAAGCGTAT TGAGCAGGTA ATAGTCAATC TTTTAAGCAA TGCTATAAAA TTTTCTGATC AAGCAAAAGA AAAAAGGTTT GTTAGGATAG ACGTGTTAGA TGAAGGAGAA ATAGTAAAGA TTATTGTTGA AGATAATGGA ATTGGAATTC CGGAAAGCGC ATTTGATAAA ATATTTGAAA GGTTTTATAG AGTTGATAAT GAACTAACGT ACGCAGTTCC TGGTACAGGT CTTGGTTTAG CTATTGTTAA AGAAATTGTC GAACTTCATG AAGGAAATAT ATTGGTTGAA TCTGAAGTTG GTAAATATAC AAAATTTATC GTGACACTTC CAAAAAATTA A
|
Protein sequence | MEIQQLLSKY MLEISKVRDE KSLYTAVSEI LKKIVSFSVL NVFNQNNLVF SEPEGQHIEK EIFSDYLPWI EQRLYPTFLP LENGYIGLIP VFKANKLLST IVIETTEEPT AEVVDYIQLL SYLSGITLEN LRLIDFVDKA REYFESIINL SNDGIVVLNE LKEIEFTNSK AKDNLKDNTE LLREIIDRIE NNEEFFEVET HKSFFSISVK QVNLLGEKKV LVNIRNITSE KEVQKLKELD KIKTNFIANI SHELRTPLAA IKAYVETMLN MPMSQEEIHE FLDVVYSQSI RLEELLSDLL DFSQLESHTM KILKESVNIC EIIEHSIETL ENMAKEKDVT VEYNCSNLEI KCDRKRIEQV IVNLLSNAIK FSDQAKEKRF VRIDVLDEGE IVKIIVEDNG IGIPESAFDK IFERFYRVDN ELTYAVPGTG LGLAIVKEIV ELHEGNILVE SEVGKYTKFI VTLPKN
|
| |