Gene Fnod_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0404 
Symbol 
ID5452880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp439216 
End bp440616 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content31% 
IMG OID640874153 
Producthistidine kinase 
Protein accessionYP_001409926 
Protein GI154249101 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTC AACAACTTCT TTCCAAGTAT ATGTTGGAAA TATCCAAAGT AAGAGACGAA 
AAATCGTTGT ATACTGCAGT ATCAGAAATC TTAAAAAAAA TCGTCAGTTT TAGTGTTCTC
AATGTTTTTA ATCAAAATAA TCTTGTTTTT TCAGAACCAG AAGGTCAACA TATTGAAAAA
GAAATTTTTT CAGATTATCT GCCATGGATT GAGCAAAGAC TCTATCCTAC ATTTTTACCA
TTAGAAAATG GATACATTGG ATTAATTCCT GTATTCAAAG CAAACAAACT ACTTTCGACA
ATAGTGATTG AAACAACCGA AGAGCCAACT GCAGAAGTTG TTGATTATAT TCAACTTCTT
TCTTACCTTT CAGGAATTAC ACTTGAGAAC CTTAGACTCA TAGATTTCGT TGACAAGGCA
AGGGAGTACT TTGAGAGCAT CATTAACCTT TCAAACGATG GTATTGTTGT TTTAAATGAA
CTTAAAGAGA TTGAGTTTAC AAATAGTAAA GCTAAAGATA ATTTAAAAGA TAATACCGAA
CTTTTACGGG AAATAATTGA TCGTATAGAA AATAATGAGG AATTTTTCGA AGTCGAAACT
CACAAATCAT TTTTCAGTAT TTCTGTGAAA CAAGTAAATC TTCTTGGAGA AAAAAAGGTA
CTTGTTAACA TAAGAAACAT AACTTCGGAA AAAGAAGTCC AAAAATTAAA AGAATTAGAC
AAAATAAAGA CTAATTTTAT TGCCAATATC TCCCACGAAT TGAGAACCCC GCTTGCAGCA
ATAAAAGCAT ATGTTGAAAC GATGTTGAAT ATGCCTATGA GCCAAGAAGA AATACATGAA
TTCCTCGATG TGGTTTACAG CCAATCAATC CGTTTAGAAG AATTGCTTAG TGACTTACTT
GATTTTTCTC AACTTGAATC TCATACGATG AAAATTTTAA AAGAAAGCGT CAATATATGT
GAAATAATTG AACACTCAAT AGAAACTTTA GAAAATATGG CAAAGGAAAA AGATGTAACA
GTCGAGTATA ACTGCTCTAA CTTAGAGATT AAATGTGATA GAAAGCGTAT TGAGCAGGTA
ATAGTCAATC TTTTAAGCAA TGCTATAAAA TTTTCTGATC AAGCAAAAGA AAAAAGGTTT
GTTAGGATAG ACGTGTTAGA TGAAGGAGAA ATAGTAAAGA TTATTGTTGA AGATAATGGA
ATTGGAATTC CGGAAAGCGC ATTTGATAAA ATATTTGAAA GGTTTTATAG AGTTGATAAT
GAACTAACGT ACGCAGTTCC TGGTACAGGT CTTGGTTTAG CTATTGTTAA AGAAATTGTC
GAACTTCATG AAGGAAATAT ATTGGTTGAA TCTGAAGTTG GTAAATATAC AAAATTTATC
GTGACACTTC CAAAAAATTA A
 
Protein sequence
MEIQQLLSKY MLEISKVRDE KSLYTAVSEI LKKIVSFSVL NVFNQNNLVF SEPEGQHIEK 
EIFSDYLPWI EQRLYPTFLP LENGYIGLIP VFKANKLLST IVIETTEEPT AEVVDYIQLL
SYLSGITLEN LRLIDFVDKA REYFESIINL SNDGIVVLNE LKEIEFTNSK AKDNLKDNTE
LLREIIDRIE NNEEFFEVET HKSFFSISVK QVNLLGEKKV LVNIRNITSE KEVQKLKELD
KIKTNFIANI SHELRTPLAA IKAYVETMLN MPMSQEEIHE FLDVVYSQSI RLEELLSDLL
DFSQLESHTM KILKESVNIC EIIEHSIETL ENMAKEKDVT VEYNCSNLEI KCDRKRIEQV
IVNLLSNAIK FSDQAKEKRF VRIDVLDEGE IVKIIVEDNG IGIPESAFDK IFERFYRVDN
ELTYAVPGTG LGLAIVKEIV ELHEGNILVE SEVGKYTKFI VTLPKN