Gene Fnod_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0399 
Symbol 
ID5452950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp435108 
End bp435773 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content34% 
IMG OID640874148 
Productendonuclease III 
Protein accessionYP_001409921 
Protein GI154249096 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00555795 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA ATAATAAAAA CACAAAAAAA ATTGATTGTA AAGATATAGA CACTCTTGCA 
AAAATTATTA TCGAAAGATT TCCGAGAGAT CATTGCGAAA AAGATGCTTA CAAAGTGCTG 
ATAACAACAA TCCTAAGCCA AAGAAGTAGA GACGAAAACA CAGAAGTTGC ATCAAAACAA 
CTTTTTGAAA AATATCCAAA TGTTGAATCA ATAGCAAATG CTAAGCCTGA AGAACTATAC 
GAATTGATAA AGCCAGCCGG TTTGTACAGA GAAAAAGCAG AAAGAATTAT AATTGTTTCA 
AAAATTCTAC TTGAAAAGTA CGACGGTGTT GTACCGAATA AACTAGAGGA ATTATTAGAA 
TTACCCGGTG TTGGCAGAAA AACTGCGAAT ATAGTTTTAC ACGTAAGTTT TGATCAGGCA 
GCCTTAGCCG TGGATACACA TGTGCATAGA ATATCGAACA GACTTGGATG GGTAAAAACA 
AAAACACCTG AGCAAACAGA GGAAGAGCTA AAAAAAATAA TGTCCCCACA ATTGTGGGGA 
CCGATAAATG GTTCCATGGT AGAATTCGGG AAAAACATTT GCAAACCTAT ATCACCAAGA 
TGTGAGCAAT GTTTTCTAAC TGAGTGTTGT GACTTTTTTA AGAACAAATA TAATTCAAAG 
ACCTGA
 
Protein sequence
MKINNKNTKK IDCKDIDTLA KIIIERFPRD HCEKDAYKVL ITTILSQRSR DENTEVASKQ 
LFEKYPNVES IANAKPEELY ELIKPAGLYR EKAERIIIVS KILLEKYDGV VPNKLEELLE 
LPGVGRKTAN IVLHVSFDQA ALAVDTHVHR ISNRLGWVKT KTPEQTEEEL KKIMSPQLWG 
PINGSMVEFG KNICKPISPR CEQCFLTECC DFFKNKYNSK T