| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0393 |
|---|
| Symbol | |
|---|
| ID | 5451866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 426642 |
|---|
| End bp | 427865 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640874142 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001409915 |
|---|
| Protein GI | 154249090 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA GATTAGCAGA AAACATATTT TACTACGAAA TACCAGGGGT TCGCTCAGTG
ACAATTGCAT TTATCATTGG AACTGGTCCG GTCTATGAAC CGGACAATTT ACTCGGTATA
TCTCACTTTA TAGAGCACAC AGTGTTCAGA AAAACAAAAA AGAGAAGCCT AAAAAAAATA
AAGCTTCCAA TCGAGCAAGT TGGCGGAATA TTAAATGCAT GGACAGACAA AGAATCAACT
GTTTACTATG CGAAAGTGCC TTCTACATTC TTTAAAACAG CTTTCCAAAT ACTTAAAGAG
CTTGTTTTTG AACCAGATTT TATAGAGAAA AACGTTGAAT TGGAAAGAAA AATTATACTC
CAAGAATACT ATTCCGATCA GGAAATTCCT GAACAAAGGC TTTTCAACAA ATTTTTTGAA
AATTTAATAG AAGGGCCACA CTCTAAATCT ATAATTGGCA CGGAAGAGAC AATAAAAAAT
ATCACGTTAA ACGATATTAT AAATTTTCAC AATGAAATGT ACACACCTTA TAATGTAAAA
TTAATATTAG CTGGATACAT TGAACCACAA GACTTAAAAA TGGTAGAAGA GCTGAGTTTA
GAAGACGGTT TTAAAACAGC AAAACATAAG TCAAAACTAA AAACAGGAAT TGTTTGTGAC
AAATTTAATG AGACACAACA GATGCACTTT TTATTTTCTC ATGAAGGAAT CCCTTTAACA
GATGAAGAAT ATGCTTATCC CGCGATGGTT TTAAACACTT TACTTAGTAG TGGCATGAGT
TCTTTATTAT TTGAGTACAT CCGTGAGAAG AAAGGGCTTG TTTACGACAT ATCCACAACA
AACATCCAAT CAAAAGAATG GGGGGTATTT TCAATATACG CTGCAACATC TGTTGAAAAT
TCAGAAAAGT TATTTAAAGA GCTCTTTTCT CTGCTTAAAA ACTTTAATTT GACGAAGAAG
CTATTTGAAT ATGGTAAAAA AAGGCTATTA GGCTCTTTAG AACTTCTAAC CGAAAGTACA
TCAGCTCTCA CTTCACTCTA TATCCAATAC TTGGTAAACG ATTTGGAGGT CAAAACAATT
GACAAAATAA TTGAAAGAAT TAAACAGGTT ACAGAAAAAG ATGTAGAAAA TGCATATGAG
AAATTAATAA AAGGACAGTG GTCATTAACA TATGTTACAC CAGAAAAGGA ACTTGATATT
GCAACCGAAG AGTTGATAAT CTAA
|
|---|
| Protein sequence | MIKRLAENIF YYEIPGVRSV TIAFIIGTGP VYEPDNLLGI SHFIEHTVFR KTKKRSLKKI
KLPIEQVGGI LNAWTDKEST VYYAKVPSTF FKTAFQILKE LVFEPDFIEK NVELERKIIL
QEYYSDQEIP EQRLFNKFFE NLIEGPHSKS IIGTEETIKN ITLNDIINFH NEMYTPYNVK
LILAGYIEPQ DLKMVEELSL EDGFKTAKHK SKLKTGIVCD KFNETQQMHF LFSHEGIPLT
DEEYAYPAMV LNTLLSSGMS SLLFEYIREK KGLVYDISTT NIQSKEWGVF SIYAATSVEN
SEKLFKELFS LLKNFNLTKK LFEYGKKRLL GSLELLTEST SALTSLYIQY LVNDLEVKTI
DKIIERIKQV TEKDVENAYE KLIKGQWSLT YVTPEKELDI ATEELII
|
|---|
| |